Gene detail

Detailed information of XP_048578652.1 in Nematostella vectensis

Genomic Location: NC_064048.1:3994375...4021892
NR annotation: XP_048578652.1, protein phosphatase 1 regulatory subunit 12A isoform X3 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

LOC5515674

ATGGCGGACCCTAGCGGCAACCAGGGTTCTAGAGCTAGTAATGCCTTGCAAAAACGACAGGATTCCCTTAGGCGATGGAAAGGCAGTGAAACCGATAGACAACCTGTAGACCGCTCAAGGAAGAAGCCCAAAATACAATTCAACTCAGGAATTGTTTTTCTTTCGGCGGTCTCTAGCGGTGACGTGGATGAGGTTAAGAAATTGTTAGCTAAAGGAGCTGATATAAACTATCAAAATGTCGATGGACTTACTGCTTTACACCAGGCTTGCATCGATGAAAATTTCGATTTGGTCAAGGTTTTGGTGGACAAAGGCGCTAGCATGGACGTTCGGGATAATGAAGGATGGACATCACTTCATGCCGCTGCCAGTTGTGGAAGTGTAGAAATAGCAAAGTATCTAATTGAGAATGGTGCAGATGTAGCGGCTGTCAACAATGAGGGCGAACTTCCGCTGGACTTGGCAGAGGAAGAAGACATGGAGGACTTACTTACAGACGAAATAGAAAATCAAGGAATTGATGTTGATGATGCACGAGCAGTAGAAGAGAAAATTATGTTAAATGACGCACAAAGCTGGCTGAATAAAAATTGTATAAATGAATCAAAAGACAAGACAGAAGCTTCAGCCTTGCATGTGGCAAGTTCTAAAGGGTATCTCAAAGTTATAGGATTATTATTACAGCTTGGAGTTGAGATCAATGCTAAAGATGCAGATAATTGGACTCCACTCCATGCGGCTGCTCACTGGGGCCAAAAGGATGCATGCGAACTTTTATCAGAAAATGGTGCTGATTTTAATGCTAGGAATAAAATGGGTCAAACACCAATTGATTTAGCCGAACCTGATATGGTAAAATTTCTAGAAGACCTAAAGAAAAGGCAAAATGATAAACCAAAAATTAAACCGATTTCACCATTAATAAAAACTAATTTGGAAACATCAGGTCCACCTCCATTAAAACGAAGCCCCACTGGTTGTAAGGATCCAACATATAACAGTACTGACTATGATATCGAAGGACTGATGAGCTCCATTACAAGAATAAAAGATCAAAATTTGTTTCTACGGGATATTAACCAAGAGCGCATGCAACTGGAGGCTAGCCGAGAAAAGGATGGCCCTGCCCCCACCAAGCCACGCCTAGGGTACGTTAAGGTGCCCAGCTTCGCGGAGTCCCCTAAAGAGGACAAGGAGAAGGAGAGGGCGTTTAGTTATAACAAGGATGAAAGTGAAAGCGAGACCGAGAGTGAGACGGAGAGCAGCACCGAGGAAAGCTCATCTGAAGAGGAACAAAAGCCTCCGCCCAGAACAACTCCTGTTCGAAAAACCGCCGTGAACTCGATACCTGCGAAACCCTCACAACAGCGCGCACAGCTCAAATCTGAATCCACGGGCTCCGAAAGCGAGACGGAAACCTCGTCGGAAGAGGAAGCTGCTCCTACGAAGACACCGCCAAGCACGGTCAACTCCCGGACACCCGTCACTCGTGCTCAGAGCACACCCTCTTTGAGCTCCTCTGTGACCTCGCCTACGTCTCGACAGCCTGTCACTACTGGCGGCAGCAGGGCGCTGAAGTCCCCCTTCCTAGATCAGGACAAGAAGGGGCCTGCCTCGCCCACGACACCGACCACACCCAGCAGAACTTTCGGCTCAAGGTTCGCAGATCGGGAGGAGAAAAAAGAACCGAGCTCGCAATTCGGATTCCCGACTCGGACGACTGCGGCAACGACGACTACTAACAGCACAACGAGTAGCATTCGGGATAGGTTCGGCTCGCGCTCGTCCGCAACGACGACGACTGCTACTACGGATAGCACGACGAGTAGCGTTCGTGATCGACTCGGCTCTCGATCGTCGCAGGACGAGAAAGAGCCGCCTTCGTCGGCCGGTGGTCGGAAAGCACGAAAGGTGACGAAGCGTGCTGGTACGGCTTTCGTTGGTAGTATCGATAATGACGATGAGGAGGAGGAGGAGGAAGAAGAGAAGAGCAACGATCTCGACAGCGCGAAGACCACGGAACCTACTTCTCACGCTGGAACCACTGACCGCACCTCTAGAACACGGCTAGGAGCCACCTCAGCAGACCGAGACAAAAAGGAGCCAGAGGCGGATACATTCACCACACGGCGCAGTCGTCTTCAGGACCAAAACAAAGAGAATGAGGAGGGAGAGGTCTCATCATGGCGAAGAAAACGGCTAGAACGAGAGAGGGAACGGGAAAAAGAAAAGGAGAAGGCTGAGGTGCCATCTTACAGGCGCAATCGCTTCCAGGACGCAGAAAAGGAGCGCGAACAGCGGAAGGTGAGAGAGTCTGAACGTTTAGAAAAAGAAAAACAGGAGAGAGAGACTAAAGAGCGAGAATTACTAACCTTGAGAGCTAAGCAGGAGAGAGAAACTAATGAGCGAGAGGAGAGACGGCAGAAGTTGAAGGAGAACCTGGATACGCAAGAGAAGGATTCAGATGACTCTATTGGATCTATGACTGCACAGAGCAGGGTTCGACGGCAGCGAAGGTTGCGGGAAAACCGCCGCAGCACTGGGGTTGCTTACATGCCCACTGATGAGGCTGAGGATGATTCCACTGCAGAAGCGAGGGCAGCTAAGAGGAATACTAAAGTTAATGAGGAGCGACCATCATACAGAAGGAGCAGACTGCCGGAGAGGGGGGATACAGAGTCATCGAGGTACCGATACTACAGCCCGCGATACTCGACAGGCCCCCGCCACAGTTACAGCCCAGACGAATATCCAAGTTACAGAGACAGATCCCATCAAACTGCGAGAGAAACTGCAAGAAGCTCTTATAGAAGTCCAACAGTACAAAGTCAAACTCGAACAAGCTATGCAGGACAAAGAAAAACTCGAACGTAA

Transcript

rna-XM_048722695.1

TGGGTTCGGCTTGCAGTCTGTTTCTCCGTCATGAAGGCAAGATGGCGGACCCTAGCGGCAACCAGGGTTCTAGAGCTAGTAATGCCTTGCAAAAACGACAGGATTCCCTTAGGCGATGGAAAGGCAGTGAAACCGATAGACAACCTGTAGACCGCTCAAGGAAGAAGCCCAAAATACAATTCAACTCaggaattgtttttctttcggCGGTCTCTAGCGGTGACGTGGATGAGGTTAAGAAATTGTTAGCTAAAGGAGCTGATATAAACTATCAAAATGTCGATGGACTTACTGCTTTACACCAGGCTTGCATCGATGAAAATTTCGATTTGGTCAAGGTTTTGGTGGACAAAGGCGCTAGCATGGACGTTCGGGATAATGAAGGATGGACATCACTTCATGCCGCTGCCAGTTGTGGAAGTGTAGAAATAGCAAAGTATCTAATTGAGAATGGTGCAGATGTAGCGGCTGTCAACAATGAGGGCGAACTTCCGCTGGACTTGGCAGAGGAAGAAGACATGGAGGACTTACTTACAGACGAAATAGAAAATCAAGGaattgatgttgatgatgcaCGAGCAGTAGAAGAGAAAATTATGTTAAATGACGCACAAAGCTGGCTGAATAAAAATTGTATAAATGAATCAAAAGACAAGACAGAAGCTTCAGCCTTGCATGTGGCAAGTTCTAAAGGGTATCTCAAAGTTATAGGATTATTATTACAGCTTGGAGTTGAGATCAATGCTAAAGATGCAGATAATTGGACTCCACTCCATGCGGCTGCTCACTGGGGCCAAAAGGATGCATGCGAACTTTTATCAGAAAATGGTGCTGATTTTAATGCTAGGAATAAAATGGGTCAAACACCAATTGATTTAGCCGAACCTGATATGGTAAAATTTCTAGAAGACCTAAAGAAAAGGCAAAATGATAAACCAAAAATTAAACCGATTTCACCATTAATAAAAACTAATTTGGAAACATCAGGTCCACCTCCATTAAAACGAAGcCCCACTGGTTGTAAGGATCCAACATATAACAGTACTGACTATGATATCGAAGGACTGATGAGCTCCATTACAAGAATAAAAGATCAAAATTTGTTTCTACGGGATATTAACCAAGAGCGCATGCAACTGGAGGCTAGCCGAGAAAAGGATGGCCCTGCCCCCACCAAGCCACGCCTAGGGTACGTTAAGGTGCCCAGCTTCGCGGAGTCCCCTAAAGAGGACAAGGAGAAGGAGAGGGCGTTTAGTTATAACAAGGATGAAAGTGAAAGCGAGACCGAGAGTGAGACGGAGAGCAGCACCGAGGAAAGCTCATCTGAAGAGGAACAAAAGCCTCCGCCCAGAACAACTCCTGTTCGAAAAACCGCCGTGAACTCGATACCTGCGAAACCCTCACAACAGCGCGCACAGCTCAAATCTGAATCCACGGGCTCCGAAAGCGAGACGGAAACCTCGTCGGAAGAGGAAGCTGCTCCTACGAAGACACCGCCAAGCACGGTCAACTCCCGGACACCCGTCACTCGTGCTCAGAGCACACCCTCTTTGAGCTCCTCTGTGACCTCGCCTACGTCTCGACAGCCTGTCACTACTGGCGGCAGCAGGGCGCTGAAGTCCCCCTTCCTAGATCAGGACAAGAAGGGGCCTGcctcgcccacgacaccgaccacaCCCAGCAGAACTTTCGGCTCAAGGTTCGCAGATCGGGaggagaaaaaagaaccgaGCTCGCAATTCGGATTCCCGACTCGGACGACTGCGGCAACGACGACTACTAACAGCACAACGAGTAGCATTCGGGATAGGTTCGGCTCGCGCTCGTCCGCAACGACGACGACTGCTACTACGGATAGCACGACGAGTAGCGTTCGTGATCGACTCGGCTCTCGATCGTCGCAGGACGAGAAAGAGCCGCCTTCGTCGGCCGGTGGTCGGAAAGCACGAAAGGTGACGAAGCGTGCTGGTACGGCTTTCGTTGGTAGTATCGATAATGacgatgaggaggaggaggaggaagaagagAAGAGCAACGATCTCGACAGCGCGAAGACCACGGAACCTACTTCTCACGCTGGAACCACTGACCGCACCTCTAGAACACGGCTAGGAGCCACCTCAGCAGACCGAGACAAAAAGGAGCCAGAGGCGGATACATTCACCACACGGCGCAGTCGTCTTCAGGACCAAAACAAAGAGAATGAGGAGGGAGAGGTCTCATCATGGCGAAGAAAACGGCTAGAACGAGAGAGGGAAcgggaaaaagaaaaggagAAGGCTGAGGTGCCATCTTACAGGCGCAATCGCTTCCAGGACGCAGAAAAGGAGCGCGAACAGCGGAAGGTGAGAGAGTCTGAacgtttagaaaaagaaaaacaggaGAGAGAGACTAAAGAGCGAGAATTACTAACCTTGAGAGCTAAGCAGGAGAGAGAAACTAATGAGCGAGAGGAGAGACGGCAGAAGTTGAAGGAGAACCTGGATACGCAAGAGAAGGATTCAGATGACTCTATTggatctatgactgcacagaGCAGGGTTCGACGGCAGCGAAGGTTGCGGGAAAACCGCCGCAGCACTGGGGTTGCTTACATGCCCACTGATGAGGCTGAGGATGATTCCACTGCAGAAGCGAGGGCAGCTAAGAGGAATACTAAAGTTAATGAGGAGCGACCATCATACAGAAGGAGCAGACTGCCGGAGAGGGGGGATACAGAGTCATCGAGGTACCGATACTACAGCCCGCGATACTCGACAGGCCCCCGCCACAGTTACAGCCCAGACGAATATCCAAGTTACAGAGACAGATCCCATCAAACTGCGAGAGAAACTGCAAGAAGCTCTTATAGAAGTCCAACAGTACAAAGTCAAACTCGAACAAGCTATGCAGGACAAAGAAAAACTCGAACGTAAGCTGTCGAGCTTTAGCGAGGACATGAAG

Protein

Uniprot

Uniprot term	Description
O14974	Protein phosphatase 1 regulatory subunit 12A OS=Homo sapiens OX=9606 GN=PPP1R12A PE=1 SV=1
Q10728	Protein phosphatase 1 regulatory subunit 12A OS=Rattus norvegicus OX=10116 GN=Ppp1r12a PE=1 SV=2
Q6DRG7	Protein phosphatase 1 regulatory subunit 12A OS=Danio rerio OX=7955 GN=ppp1r12a PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR051226	Family	Protein Phosphatase 1 Regulatory Subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24179	PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004857	Molecular Function	enzyme inhibitor activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0019208	Molecular Function	phosphatase regulator activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17458	PPP1R16A, MYPT3; protein phosphatase 1 regulatory subunit 16A	-	Protein phosphatases and associated proteins	ko01009	deepkoala