Gene detail

Detailed information of XP_048578779.1 in Nematostella vectensis

Genomic Location: NC_064048.1:8540800...8561204
NR annotation: XP_048578779.1, translation initiation factor eIF-2B subunit epsilon isoform X2 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_048722822.1

cttcctgtgtaaaatatttgaaacgtATCAGTTCCGCACGCGCTTTCTCGAAACAAATGTTGACGTCATTAAAAGATTTGAAAATCTAACGGAAAAAGGAATGTCGATGAGCAGTTTCTAGCTCAAAATGAActctttgaaagaaaaaatggcGCAGCTTAAAACGCGATTAGATGAGGCGAGAGATCGAAAAGAAACCGCGGAAACCGAAACGGGAACCGCCAAACGCAAGCCGAAAAAGCGGAAGAACGCGCGTCTGCCCTTTACCGCCACATCCAAATGACAGAGATGCAATTTGAAAAAACAATAGCGAGACTGGAAGAGGCTCAACACAAGCTGAAAGCGGCGGCTACCGTAAAACAAGATAACAGATCATGGGGAACCAGGTTCATTGTCATATCATTAGTGACAAATATGCAGCAAGAGTCTCCAATTTGTACACCTATGACGCCATAAGtAAGGACATACTTCATAGATGGGCGTACCCCATTGTGCCAGACAATAGCTCCTTTTTCATGGATGATTGCTACAGCTACAGCAGACACAACTTGTACTTGGACAAGAACCTATCTCTAGCAAGGGACTGTGTCTTAGAAGAGAACCTGATTATTGGTGGTGGTACATCTGTGGGCACAGGAACAGTCATATCTAACACTGTTATAGGAAAGAATTGCGCTATAGGTGATAATGTTCGTATAGAAGGGGCTCACTTATGGGATAATGTCACTGTTGAAGACAACTGCTACATCTCATGTGCTATCCTCTGCTCTAATGTCCATATAAAGAAGAATGTAACAGTCACCTCAGGATCTGTAGTCTCATTCAATGTGGTGTTGGGACCTGATATCGCTCTGAGACCGGGAGCACGGGTCACCCTCAAGCGGCGGGAAGAAGATGAGACTGACTTTGGAATGGATGACCTGTCCATTGGTGAGAAACCCAAACAAGCAGAGCCGATTGAATTCAATAAGACCGAGGTGGGCGCCGAGGGTTCGGGATATCTGTGGTTCGAGGAAGAGGAATCCGATGATGAGTCTGATAAAGTGGAAGATGTTTGGGGTGCTGAAAGGGAAAGCTCCAGTGAAGATGAAGTAAGCTCCATTGCCAGCGATATTAGTAGCCTGCCGGACACGCCTCCACCCGAGGATTCCAGATTATTCTACAATGAAGTACTGGAGACAATCCGACTGGGCGTGGTCGATGGAGTGTCAGGGGATAACATGATCCTCGAAATCAACGCCTCCAAGTACGCCTATAACGTGACGTTCCGTGACGTCAATCAGTCAATCGGGAAAGCGTTACTGGAGAGTGCGTTACACGACAACAACATGGACAACCAGGCACAGTCAGTCAATCTCAAAAAGACGATGATGCATCTGAAACCAGTTTTCGAGAATTACGTGAAGGACGCAGAGGGACAGAGAGATCTTATCGGCGCCATCGAGGACTTCTTCCTTGATAACGCGTGGTGTCGCGACACGCTGCAAGTCTGTCTTCACCTGCTCTACGAGATGGACGTGCTAGACGAGACCGTGATCCTTCACTGGCACGCCCATCCGGGACCTTCAAATGATGACCAGGCCATGGAGGAGCAGAAACGTGACCTCAGGCAGActgccgCGCGTTTTGTCACGTGGCTTAAAGAAGCCGAAGAAGAAAGTGACGATGAAGACGATGACGATTAGAAAACTGGATTAAAGTCTGGATAGTTCTAATATGTTTTCATACTTTCGAGAGACAGCCCGAGTCAGTCaaacctttgttattattcaCATTCAATCATGGAAGAGACGCAATGCGCACAAATCTCAAAATAACTGTATCAAAACAAAGCTTTCTCCTTCATTTACCCAAATTAGATCACAATAGCTTTCCCAAATCAACCGATGGAGATTGTTGTCTTATTACACTCTGTAGCTTAAATAGGATGGGAAAAAGGCAGCTTGCAGAGATTCTTGAAGGgtattctgattggctctatGCCTCTCGGTAATATAAGAATGATTTACAACCATCCAGGACTTCGGTTTTTGTGCTGTAAATTATAAATAAAGGAAACTATAGTGTT

Protein

Uniprot

Uniprot term	Description
Q64350	Translation initiation factor eIF2B subunit epsilon OS=Rattus norvegicus OX=10116 GN=Eif2b5 PE=1 SV=2
Q8CHW4	Translation initiation factor eIF2B subunit epsilon OS=Mus musculus OX=10090 GN=Eif2b5 PE=1 SV=1
Q13144	Translation initiation factor eIF2B subunit epsilon OS=Homo sapiens OX=9606 GN=EIF2B5 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02020	W2	eIF4-gamma/eIF5/eIF2-epsilon	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR044123	Domain	Translation initiation factor eIF-2B subunit epsilon, W2 domain	Interproscan
IPR003307	Domain	W2 domain	Interproscan
IPR051956	Family	eIF2B Complex Subunit Epsilon	Interproscan
IPR011004	Homologous_superfamily	Trimeric LpxA-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45887	TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0031369	Molecular Function	translation initiation factor binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003743	Molecular Function	translation initiation factor activity	Interproscan
GO:0005851	Cellular Component	eukaryotic translation initiation factor 2B complex	Interproscan