Gene detail

Detailed information of XP_048579126.1 in Nematostella vectensis

Genomic Location: NC_064048.1:6808868...6818710
NR annotation: XP_048579126.1, EGF-like repeat and discoidin I-like domain-containing protein 3 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_048723169.1

gtttttctagCCATTTCGACGAATGTTTATGTAAAGAATAATAATACCTGCGACACATAATGCCTTCTTAAAAGGTATTCCGATTGGCAGAGACAGgaatttccaatttttttgattggataaaactACGATTAAATTTTTAATGTTCTTTTTGACACAAACCTTAAAGTTGGGAATCTACTGTGTTGTAGTTCACAATCAATAAGAGCATAAGATTAATGGGTAAATAATCCCGTTTTCCCTTCGTTTGTAGACTTTCTAAAGTGGCGTAACTAAGAATCCTGCGGCTTATTAAACTCCGCTGAATTATGAAGATTTCTGACTATTTCATTGCCGTCATTTACTTCATTGGAAGGGTTTCAAAAGTACAATCATCAGTTCCTCCATGCCGAATGCTGCGCAGAAATGATTGCATCCCAAACATGTCGCTGAACACCAGCGAAAGAATCTTTTCAAAAGAAGTCCCCACTCAAAGGGAAGACCTCTGCATGACGGAATGTTATCACGAGGCGCTTTGCATGTCGTACAATGAAGGCCCGGTATCAGATGATGGACTGACATTACCATGCGAACTGAACGCTGTTGATCATGTCGTTGAAGACAAGTTGGTTCCCAGAGCTGGGTACAGATACTGCAGCTTTATGAACCCGTGTGTGTCCAGCCCATGTTCTGAAGGCTACAGCTGTCGCCCAGATTTGAACAAAGACGACACATACTCCTGTACCCATGTTGATGAATGCGCAAGCAATCCCTGTCAGAACGGAGCTACGTGCAATGACGGCGTTAACAATTACACGTGCGTGTGCCTTTCTAAATTCATCGGCGCAAACTGCGAGACGAGTTGTGATCTTGCAGTTGGGGTTCAGGACAGAAATATCATCCCTGATAACAGCTTTTCCGCATCGTCGTACAGAATATCATCAGGTTACGCCTCAGATTTATTTGCACCAATGAGTGCCCGACTAAACGGGGGTGGATATTGGATTCCTTCGGGAATCCAAAGCTTGCAGTACCTCCAGGTTGATTTGCTGTCTTTGTACATGATTTGCGCCGTGGCAACACAAGGAGGAACCCTCTCGGAGCATGATACAAGAACCACAAGGTACAAGCTTTCGCTCTCAACAACGGGGTCTTCCTGGGAAATCTACCAAGAAAGTGGCGCAGAGAAGGAGTTTCATGGAAACTACGACAAGCCAACAGTTGTGAAGAATCCTTTGGCAAAAAAGCCGACTGCAAGATATATCAGATTCATACCAACACAATGGCCCTACTATCCTGGTTTTCGCGTTGAAGTCTTTGGGATTCGTCAGTAAAACTTGTAGAATGTTCTACCAAATTTGATTATAATCACTAGGATCGTCATTGGTGCGGGTCTTTGGGAATTTTGCTTTCCTAACATCATAAAATGCTGAATTAAACTTCACTATCATACTTGCTAAACCCTACTTCAACTACTTTTGGGAGCCGACTGCAAGATATATCAGATTTATACCAACACAGTGGCCCTCCTATCCTGGTTTTCGCGTTGAAGTCTATGGGATTCGTCAGTAAAACTTGTAGATATGTTCCACCAAATTTGATTATAATCACTAGGGTCATCATTGGTGCGGGTCTTTGGGATCTTCGCATTCCTAACACAAACCAATCCAGACACTTGCTGCCTTGCAGGATAATGCCTTTTTAGGCAAAGGCTAGGAGAAGGAAACCTCCGACTACAAACCGCCACTGCCTTGTGGCTATACCTTATAGGAAAGGCTAAGGGAGTAAACCCCGACAGAAAATCAGGAGTCAGAGCGCCTAAAGTGGACGACGACGCATTGTCTTACTTGCAACTCCTGCGGGGTATCTGGAGTCAAGCTATCGTGACCATGATACGCCCTTAGGCCCATCAGCCTGCGCGTAGAGGGGACGTTCGTCACAAGatgtagaaaaataaaacaaaggaacGGCAGTCACCGTCTTTACGCTTATATATCCGGTCACCGCCGAAGGAGGGATAAGACATCGCGTCTCACTGGAAAGCCATAGCTGGAAGCAAACTCGGCAGACCCCAGTGTCCCAAGAAGACGATGTTCCACCATGGCTGATATCAGCTCGATGGGGAAATCTCGACCACCAAAACCTGCATCAGGCTCGTCAGATATCAATAAAGGGAAACGCATCCAGTGCTTCGTTTCTTCGCTTTTATTCTACGATAAATCTCCGATAATtctgttatatatatatggacCTCGATGGCTTGAACGTTGACACTGCctgcctacaagaaacacgaCTGGTTCGAAATGGCCCGatcagaaaataaaataacaacctCTACTGGAGAGGAAAGCCCTCAGAGCCATCAAGGCAGAACGGAGTCGGTTCTTCCGTTCACTGTGGAACACACTGATCTCTTCCATTTTTCCTCCAACAAATTTAAATTGCTAAACACAATCTCAGCCCCCATCAGCATAGTCAGCTACTATGCTGCAACATTTTGCTCTACATCAGAGAAGAAGGATAAAGACTTAACAAGTTCTGGACGAAATTATCTTGTTCGATGCCATGTGCTGACCACGAACAAGGGCCATCTTTTATTAAaagagacaaaataaaaactaatGGTCATGCTATTGGCGATCTACTGTTTCCTTGGCCTCTGCATAGCGACACGTTCTTCTATGCTAGGAAACACACCAAAGTCCATGGCGTAATTCACGTTCAGGCCAGACTTAACCTTGTCATCATAGGACATTCAAAAAGGGCCGTGCTTGAATAGATTGGCCCTCTTTTGGACCCTGTTTAACTTCGCGTTCGTTTGGACTTAGGAGTCGTTGGAGGCGTTTGAAGAATTTCTGGTGTTATCGCCCgatttattgtaaaaaaaaaaactactacGTAGGATTGTTgtttacagccaaattcgttgttgcgcgactacggcgaatccaaaatccttgtcttgtttgggaatagcgcgaaGTCAGACAAAAGCTTTTggggcggtttgtctggttttgattgtctggtttgattgactacgcgctattcccaaacgaagaaaggaatttGGGTTTCTGGGAgctcgcgcaacaacgaaatTGGCAATAAAGCTTCTAGATAGAAAAGGGGAATTGCGCTAAGTGACCTTTCTGGTTGgcaaattataaacaaaatagacaaaaaatcagaaatgactgcgcccgtcacgccAGCGAACAATGAAAAACTGAAAGATTTTAATGAAACTAAGCCCTttctaataataaaagaattctttttttttgttagcgctgaataagtttctttttgttgctgtgATTTTGCCGCTTAATGCCTGAGGCGTGCGCTtaagtttgccacccaaacagtcacgtgatctcttagcgcaagccTCTTATTGCATTGGAGAAGCTTCAATATGCGAACAACTAGGCTTTGCAAAGAGAACATGCACATTTTTATCAGTACGTTTTTCACAGTTACGTAttgcctcgtacccaggcgtCTCTAAGCTGTGGCCATCTTTTTATGACATATCCTTCAGATTTCCCGCTTGCTTCATTGGTCAGTTCCAAAAGCGTCTGCCATTTCCGACCGAGTAGAACTGATCAAGAGTAGCTAGGGGACGAGGCAAGTGTTATGCAGTAGGTAAACAAGTGTATTGCATTTTCTAGATGTACTATAACAGAGGCAAACATCCATATCGAGTACAACTATATATATTCTTAGAGTTCGCCATTTAGAGTTCTATCAGAAatcctgcattctgattggttgagcCAATAATGGTCTTTTACACCTTTCGCTGTTCATTAACGGGAAAGGGACATTCATTTGTGCTAAAAGTTACATCGATAGCGTGTATTGTACGTTCATCAACATCGCACGAAACATCATTTAGCTTGACTCGACTTTCAATAACAATTGAATATTCGTGAACATTCATTAGCATCAACGGAGAAACAATAACGCACTTGGACATTTAATTCGATTGGAGCGAACATTCTTTTGCGCGCAATAAAAATTCTGTTGCACGTTTGGACAATCAGTTATAATGACAGTTATACGAAATAGAATTTCATTAGTGCTATTAACATAAACAACGACAATCAACAACAGACAATCATATATTCaatcattgttattgaaaGTCGAGTCATCGCTAAGGATGTTTCGTGCGATGTTGATGAACGTACAATGAACGTTAACGTTACAACGTTTGGCACAAATGAATGTCCCTTCCCTGttattgaacagcaaaaggtgtagtGATAGACGGTGAGTAGCGAAATGCTCGGGAAAATGGCGGATGAATCGCATTTGCCAATGTTAGTGACGACTTTTTAATTGATAatgctagaaaaaaaaattaaccagATAtgaaatgatgaagattttcAACGGTAAGAAAACAACTGAACACGCCTATAAATTCATGtaatattttcaattttttcaaCTTTCACAGGGAAATCCCCGAGAGATGTAACATTTttcttgtgtttgtttacaaCCAGTTTATTTTACAGAATGGAAGTCAAACAGATTACAGTTATCGAATAAAAGAAATCACTAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00754	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan
PF00008	EGF	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR008979	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR000421	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24543	MULTICOPPER OXIDASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18262	EFEMP1, FBLN3; EGF-containing fibulin-like extracellular matrix protein 1	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala