Detailed information of XP_048579310.1 in Nematostella vectensis

Genomic Location: NC_064035.1:13209117...13218512
NR annotation: XP_048579310.1, speckle targeted PIP5K1A-regulated poly(A) polymerase-like isoform X3 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3MHT4Speckle targeted PIP5K1A-regulated poly(A) polymerase OS=Rattus norvegicus OX=10116 GN=Tut1 PE=1 SV=1
Q8R3F9Speckle targeted PIP5K1A-regulated poly(A) polymerase OS=Mus musculus OX=10090 GN=Tut1 PE=1 SV=1
D2HS90Speckle targeted PIP5K1A-regulated poly(A) polymerase OS=Ailuropoda melanoleuca OX=9646 GN=TUT1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12874zf-metZinc-finger of C2H2 typeDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF19088TUTaseTUTase nucleotidyltransferase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR045100DomainTUTase nucleotidyltransferase domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12271POLY A POLYMERASE CID PAP -RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0031123Biological ProcessRNA 3'-end processingInterproscan
GO:1990817Molecular Functionpoly(A) RNA polymerase activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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