Gene detail

Detailed information of XP_048579640.1 in Nematostella vectensis

Genomic Location: NC_064035.1:12598645...12614794
NR annotation: XP_048579639.1, growth factor receptor-bound protein 10 isoform X2 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_048723683.1

TGTTATTACCCATGAGTGCAGGCTCGAATGGAGCTCAAATATCTTTCAAGTCGTTGAGATGTTGTTTTTACAATACAATCGAAAATTCCCCATTATATGACCTTACTAAATCACGGTATCACGGAATTTCCTGTTTGCCAAGCTTTAGCCTCAGAGCTGTAAGCATACATGATTGGAGAGGGTTGATGGTCATCCTGTGGTAGGATGAATGACAACCAGGTTGCAGATTTTAACAAGATGCTCGAGGATCTGGGTCACATGATCGGTGACTTGGATAACCTTGATGGGGTTTCATACTCGAAGAACTCGAAATACGAAGACCAGGAGCTTATGCTCGACAGCCTATTGGCGGAATGTGACGACTGTGACGATGATAGGCCGCTGATTCCCCCGCGGGAGCCCATCGTTGCCATGAAGCTTTCTCCTCCTCCgcaaaggcaaaaaaagtCCCTAAACACCCACATGTGGGTCACCCTCCCTGATAAGGAGTGTCTACCGTCAGGGGAGGTCGCCTCCGATGGGGAAGTAACTGGGAAGTTCACCCAGAAGTCGGACTTCGAACAGGACGCTCCACAGTCGCCGGGCTCGATGCCCATCAAGGTATTCAATGAAGACAACAGCTCTGTAACGTTCAGCGTCGGTCAGAACACTACTGCAATGGAGGCGTGCTACAAGCTGGTGCTACTAAACGCCATCAAGGAGGATCCCACATGGGTCTTAGTGGAACATCTAACGGATCTTGGCATCGaacgaaATCTTGAAGATCACGAAAAAGTGATCGATGTGTACAACTCGCTGGCTGGAAACTCAAAACTTCTTTTTAGAAAAGATCCAACAAAATACGACTTTTTCACGAACACGGCGAAATACGCCGACACCAAATTATTTGAAGACGAAAATACCGAGGACAAGGCGGTTTCCGAAAAGGCCCGAAAAGCGaagaaaatattattaatGAATCTCCTGAGTAAATGCACAAGAGTTCCAGAAATTTCCGACGTCCTCCACATTAAAGATTACACCAAGAAATCTTGGACAAAAAAGTTTATTATTTTGCGGGGATCCGGATTGTACACCTCACATAAAGGAAAATCTAAGgcATTCAAAGACCTCCAGTCGTTTGCGCAGTTCGATGGCAACAACCTGTACACGATGCTAAACGCTAATAAATCTCACAAGGCACCTACGAACTTCGCCTTTAGTCTCGCGCCTTCTGGTAAGGACGCTAAAGAAGTCAAGTGCTTCTGCGTAGATGAAGAGAAAATGTATTTAGGCTGGCTACTCGGCATTCGATTGGCTAAGTATGGGCCTCAACTTCGACAAAATTACGATGACATGCTGAGAAAGTTTGCGATTCTCGCCAGATTGGAGCCGCTGCCACCGGTAATGGATACGCCTCCTCGGCCAGTGCCAACAGAAAGCCAGCCTGTCAATCAAGATTCGTTACCTAGTGACCGTGTTGCCATGGATTTTACTGGTACACGGGGCAAGCTCGTCACAAACTGTAAAGAGATTGAGGAGTTGACGAAGCGACAAAAACCGCAACTTTCACGCCGACTGTCGGCAAATCATTTCATCAGCAATTCCTCGTCGACAGGTAAGGAACTTGCCGAAGAGTTCTGGTTCCACGGGCGCATATCTCACGAGGAGGCGCTAGTTCTTATGAAAAGAGAGGGATTCGAAGATGGGTTGTTCCTGGTTCGAGAAAGTTGCAGTGTATCCGATGTATACGTGTTAACGTTCTGTATGAACAAaaaagtctttcattgccagcTTGTGCAGgaTATCGGACCTGGCAGCAAAATGTACTATCGACTGGACAAGGGTCCGGCATTTCCGTCTATCCTTGAATTGATCAGATATTATCAAAGAAAGACAGTCAATGGCATCTCGGTGGCCCTAAGACGACCCTGTACCGTCAAGAGACGGCGGAATTTCTCATGTGTTTGACGACCATTCGAAACTCCAGTCGCCATAAGCACAGtgggtgtttatttttttttaaaggggaGGGTACATATTATGGCCATGTTTGTAATTAATGTATGGGGGATTGCTCTGGTCTGAGAAATTCCACAAAACCCTCCTCAGGGTGCAGACGAGTGCGTCACCAAGGTTACGCCGGTCTAGAATAGAACTGGTGTGCCCCAGGGCATAAATGCTCTGTCAATGAAACAAAGTTCGTTGCGTTAATTATGAATAGTTCCCTAACAAGCTCCAGATCGtctgaaaaaatgttttttttttttatttttttaataaatgctCTGTCTTTGTTATGTTTTCTACTACCACTACATGACCTGGACTAACCAGGCAATTCAACAAGTGCTTGATTCAGAAAAAGACACTACATTCGATCCTTTACATAGGGAGCTAGTATTCAGAATGGAAATTAGAAGCTTATTttgaatgaaataaaaagcattAATATGAAGCCATGGTATGTCCAAAGAATTCAAAGAGTTCTTCAAATAAAATCCAAAATCTCTAAAATCTGATCATCAGGGGCGGTTCCAGGAGGGgcggggggcgaagcaagagtttcaagaaagggggcggattcattgttcttctctatttttaagccaaatatccgAAAATAGGTGTGGGCGGGGCCCGCTCGggccacccctagatccgcccttgATCACTCCATTCATTTGTCAAAAAGCATTTTCAAACTTACTTGCGTTCTGCAAAAGCCTATTCAAGTCAGGCTGTCGAAGAAATATATTTGATTGATTGttataaataatttttcattgtattttCCCTGTTATTATTATGTCTTTGTTGCATAATCGAAGATCCAACGTACTTTGCGAGCGCTCCCAAAAGTCAATTCCCGGGCAGGATTTTCGTGGCCGAGAAAAAGAGCGCTGAATCTTTGAGCATGTTTTTGGTGTTGATTGATAAGCATTGTAAAACACAATTCTCTCTTTcctttatataataaaaatcaaCAAACTTC

Protein

Uniprot

Uniprot term	Description
B5KFD7	Growth factor receptor-bound protein 10 OS=Sus scrofa OX=9823 GN=Grb10 PE=2 SV=1
Q9JLM9	Growth factor receptor-bound protein 14 OS=Mus musculus OX=10090 GN=Grb14 PE=1 SV=1
Q6PFT9	Amyloid beta A4 precursor protein-binding family B member 1-interacting protein OS=Danio rerio OX=7955 GN=apbb1ip PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017	SH2	SH2 domain	Domain	Interproscan
PF00788	RA	Ras association (RalGDS/AF-6) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000159	Domain	Ras-associating domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR000980	Domain	SH2 domain	Interproscan
IPR039665	Domain	APBB1IP, PH domain	Interproscan
IPR036860	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR039664	Family	GRB/APBB1IP	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11243	GROWTH FACTOR RECEPTOR-BOUND PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007165	Biological Process	signal transduction	Interproscan