Detailed information of XP_048579827.1 in Nematostella vectensis

Genomic Location: NC_064035.1:7737232...7759908
NR annotation: XP_048579827.1, syndetin isoform X2 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8CI71Syndetin OS=Mus musculus OX=10090 GN=Vps50 PE=1 SV=2
F1LSG8Syndetin OS=Rattus norvegicus OX=10116 GN=Vps50 PE=1 SV=1
Q5ZKV9Syndetin OS=Gallus gallus OX=9031 GN=VPS50 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10475Vps54_NVacuolar-sorting protein 54, of GARP complex RepeatInterproscan
PF10474Syndetin_CSyndetin, C-terminalRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040047FamilySyndetinInterproscan
IPR019515DomainVacuolar protein sorting-associated protein 54, N-terminalInterproscan
IPR019514DomainSyndetin, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13258UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000149Molecular FunctionSNARE bindingInterproscan
GO:0032456Biological Processendocytic recyclingInterproscan
GO:0042147Biological Processretrograde transport, endosome to GolgiInterproscan
GO:1990745Cellular ComponentEARP complexInterproscan

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