Detailed information of XP_048579846.1 in Nematostella vectensis

Genomic Location: NC_064035.1:1718810...1736256
NR annotation: XP_048579846.1, integrin beta-6 isoform X1 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6AYF4Integrin beta-6 OS=Rattus norvegicus OX=10116 GN=Itgb6 PE=2 SV=1
Q8SQB8Integrin beta-6 OS=Bos taurus OX=9913 GN=ITGB6 PE=1 SV=1
P18563Integrin beta-6 OS=Cavia porcellus OX=10141 GN=ITGB6 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17205PSI_integrinIntegrin plexin domainDomainInterproscan
PF07974EGF_2EGF-like domainDomainInterproscan
PF08725Integrin_b_cytIntegrin beta cytoplasmic domainDomainInterproscan
PF00362Integrin_betaIntegrin beta chain VWA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012896DomainIntegrin beta subunit, tailInterproscan
IPR015812FamilyIntegrin beta subunitInterproscan
IPR016201DomainPSI domainInterproscan
IPR014836DomainIntegrin beta subunit, cytoplasmic domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR033760DomainIntegrin beta N-terminalInterproscan
IPR013111DomainEGF-like domain, extracellularInterproscan
IPR002369DomainIntegrin beta subunit, VWA domainInterproscan
IPR036349Homologous_superfamilyIntegrin beta tail domain superfamilyInterproscan
IPR032695Homologous_superfamilyIntegrin domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10082INTEGRIN BETA SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05719ITGB1, CD29; integrin beta 1-CD moleculesko04090deepkoala

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