Gene detail

Detailed information of XP_048580204.1 in Nematostella vectensis

Genomic Location: NC_064035.1:5219893...5225876
NR annotation: XP_048580204.1, 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_048724247.1

TTTGTACCCTCTGTAAAATCTGGCGATTTGTCAAAGAGtttcctgtggtataccgaaACTCCCGCGAGCCAGGTAGCAGGCTATACTGCAATTGGGGCCTATTGCATTGGTTGTTATCGGAGTGTGTGAGCGCGACAGAAAGAATCTTTCACAGAAAGATTCAGATGCACGTGCGTGCGCTAAACAAAGGTGAACAAAGGCTTAAGGGGGGCCCCTTAAGACCCAGGCCACAGCGTGCTGTACATGATGACAAAATTACCACACGACCATAGTAACACACTTATTCCCAAGAGACGCAAGCGTAAAAAAGACCTAGATATTTTTCAGCCTATATTTCAGCGAGCTGTCCGTGGCGTAATCGACTAAGACagggctgggatcctggttattgcctccccattaatgcgcgggtacctcaggttcctttgtgttgtacagttcgctagatagcggtgctggggccgaaatctccagcctagcTGTAAAGCTTCAAGCTGGCATACGGCGTTTCAGCGtgtgtctggaagtatggtcaatttttttttatagtggTCTGATTATACATTCGCATCTTGGGCCAGtgggcttatttttttttcgtttttttttcctttatcaATTATCAATACTATTATAGTTGGTTTAGTCCAATCACACATATATGAATAACGATAATTTGTTCTTTATGTCTACGATATCCTATTTCTGTGGATTCCTGTGGAAACGCTGTGGAAACGCCTGGCGGAATTTGACATCTTGAGTTCTCTGTGCAGATCGTCTAATTACTTCCCGAGGTTTTTCTAAACTTTGTTTAGCCTAGATCATGGTTTATTTTAAGGTTGACATACATAATCACATTCTTCCAGAAAACTGGCCCGATCTTAAGGAGAGGTATGGATATGGTGGATGGATACAACTTGACCACCACTGCAAGGGAAAGGCCCAAATGATGAAAGATGGAAAGCTTTTCAGAGTGATCGAGGAGAATTGTTGGTCACCTGAAGCTCGTATTAAAGACATGGATGCTACAGGTGTTTCTGTGCAAGCCTTATCAACTGTTCCTGTAATGTTTAGTTACTGGgccAAACCGAAAGACACTCTAGATCTCTGTAAAATTTTGAATGACGACCTTGCCATGACTGTGGCCAAGTACCCTAAGCGCTTTGTTGGACTTGGCACATTACCAATGCagGCCCCTGATTTGGCACTTGAAGAGTTGAGAAGATGTATCAAGGAGCTAGGTTTTCCAGGTATTCAAATTGGATCTCATGTGAATGAATGGAATCTTGATGCACCAGAGCTTCAGCCTATATTTGCCCTGGCAGAGGAACTTAATGCAGCAATTTTTGTACACCCTTGGGACATGGAACTTTCTGGAAGAATGTCCAAATATTGGTTACCATGGCTTGTAGGTATGCCTGGTGAAACAGCTCTAGCGATGTGCTCCATGATATTTGGTGGTGTTTTGGAGCGCTTCCCTAACCTGAAAGTGTGTTTTGCACATGGAGGTGGTTCCTTCCCCTTTACTATTGGAAGGATAGAGCATGGGTTTAATGTAAGGCCTGATCTTTGTGCCGTTGATAATCAAGTTAACCCAAGGAATTATCTTGGTCGTGTCTTCACGGATTCTTTAGTGCATGACACAAAAGCATTACAATATTTGGTAGACACCATGGGTGAGGATAATGTTGTTCTTGGAAGTGATTACCCCTTTCCTCTTGGTGAACATTGCCCTGGCAAGCTGATAGAAAGCACCTATGGGAAAGATCCTAAAGTCAAGGATAAACTTCTCTATGGCAATGTTATGCGATTTCTTGGTCTGGATATTGGCATGTTCTCTTCGGATGACAGTAAAGAATCAAGCAAAAAGCAACCTTCCTCATCCCAGTGACATGATAAAAATCAAGCAAACTGATATCACATGTCATGTTATAAATTCGACCCATCTCTGCCGTGGTACATGAAATGAGTAAAGGACAACCATGTGCTCAGTGACGCAATGTAAAACAATCACCCCAATATGACACATGCAACATTACATAACCCTTTCATGCCTAATGGCATGTCATGTAACACCGAGATAAATGGATAGTATCTCATTTTATATAACTGTGCAGAAAAGGACAGAAAGAAGTTTCCAAAGTTTGCTTGATGTGCCGATGTCAATTTGTTATAAATAGCTTTATAGGGGTGTATCATTTTTCAACTGAAATTGTGTAACAATTTCACTGTGTTTTTAGTATATAGTATACATTATTTTTATAGGAAGCCAAAGAAatgtgaaacaaaaaaaaaacgaaactaATAAAGGTGTGTATGTGTTTGTCTAA

Protein

Uniprot

Uniprot term	Description
Q0II68	2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Bos taurus OX=9913 GN=ACMSD PE=2 SV=1
Q8R519	2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Mus musculus OX=10090 GN=Acmsd PE=1 SV=2
Q8R5M5	2-amino-3-carboxymuconate-6-semialdehyde decarboxylase OS=Rattus norvegicus OX=10116 GN=Acmsd PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04909	Amidohydro_2	Amidohydrolase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006680	Domain	Amidohydrolase-related	Interproscan
IPR032465	Family	2-amino-3-carboxymuconate-6-semialdehyde decarboxylase	Interproscan
IPR032466	Homologous_superfamily	Metal-dependent hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21240	2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016787	Molecular Function	hydrolase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0016831	Molecular Function	carboxy-lyase activity	Interproscan
GO:0019748	Biological Process	secondary metabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03392	ACMSD; aminocarboxymuconate-semialdehyde decarboxylase	EC:4.1.1.45	Tryptophan metabolism	ko00380	deepkoala