Detailed information of XP_048580243.1 in Nematostella vectensis

Genomic Location: NC_064035.1:8767757...8770084
NR annotation: XP_032242609.1, superoxide dismutase [Mn] [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P00449Superoxide dismutase [Mn] OS=Geobacillus stearothermophilus OX=1422 GN=sodA PE=1 SV=2
P28760Superoxide dismutase [Mn] OS=Bacillus caldotenax OX=1395 GN=sodA PE=3 SV=2
Q5HNZ5Superoxide dismutase [Mn/Fe] OS=Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A) OX=176279 GN=sodA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001942 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02777
all species →		Sod_Fe_CIron/manganese superoxide dismutases, C-terminal domainDomainInterproscan
PF00081
all species →		Sod_Fe_NIron/manganese superoxide dismutases, alpha-hairpin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001189
all species →		FamilyManganese/iron superoxide dismutaseInterproscan
IPR036324
all species →		Homologous_superfamilyManganese/iron superoxide dismutase, N-terminal domain superfamilyInterproscan
IPR036314
all species →		Homologous_superfamilyManganese/iron superoxide dismutase, C-terminal domain superfamilyInterproscan
IPR019832
all species →		DomainManganese/iron superoxide dismutase, C-terminalInterproscan
IPR019833
all species →		Binding_siteManganese/iron superoxide dismutase, binding siteInterproscan
IPR019831
all species →		DomainManganese/iron superoxide dismutase, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43595
all species →		37S RIBOSOMAL PROTEIN S26, MITOCHONDRIALInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004784
all species →		Molecular Functionsuperoxide dismutase activityInterproscan
GO:0006801
all species →		Biological Processsuperoxide metabolic processInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_048580243.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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