Gene detail

Detailed information of XP_048580256.1 in Nematostella vectensis

Genomic Location: NC_064034.1:6699135...6710911
NR annotation: XP_048580256.1, protein DENND6A [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_048724299.1

ATATCCCCTTGGTTTAGAATGCAGAGgcgcagaaaaaaatatggcgGCCTCTACGATGGAGGACGAGTCAGACTTTTCCTTCGAAGATGAAGCCAACGAGTTACCCTGGGACAGGTTTAAGAAGTGGATAACATGCTTTTGTGTTGTGACGTTCGACATAGAGGTTGGCCAAGCGATGGAGCTTGTTTACCCCAAATTTGTGCATCTATCTGAGAAAGAGAAAATGAACATTTGCTACTTGTCGTTTCCTGACTCCAACTCCGGTTGTATGGGAGACACAACCTTTCATTTCCGCATTAGATGTAGTCCCCGGTCATCTGGGAAGTCCCCCAGCTGTGAGATGCGTGAGGCTGAAGTGCCTCTTGGATTCAGGAGTGACCCGGCCCATTTGTATGGCTCTGTGTTGTTTCGTCAAGTTAAAGACCCAAGTTTACAGAGGGGGTATTTTCAAAAGtcctTAGTACTTGTATCAAGATTACCATACATCAATTTATTCAGTGAAGTGGTCAAAATAATGGCTCCTGGATTCTTTGAGAATGGTGAACCTTCCCTTGAAGCTGCTTGTCATAATATTGACCAATGGCCTTCGCCCCAGGCTGGGTATACTCTACAGCTGCCACTTATGGGTACTGTGCTCCAGGTACGAGTACCATCCAGGAAGGATCGTCCAGGAGCTGTGTCATCCCCTGATAGTCCAATGAATATCAATATCATGgaaCCGATTCCAAGCCCACGAGTTATTCCAACCCTCAAAGAACCAGATTCTTTCAAATATCTTCAGTCTGTTCTCGGTCACATTCATCTGCTATGGGAACTTGTTCTCACCAATGAGCCACTGGTAGTCATGGCACCATCTCCAACTGTGTGCTCAGAAACGGTCCAATCTCTTACCACGCTTATTGCACCACTTCATTACTGCTCGGATTTCCGCCCATTCTTTACAATTCATGATAGCGAGTTCAAGGAATACACAACACGTACACAGGCACCCCCTTCTGTCATCTTGGGGGTTACAAACCCCTTCTTCGCCAAGACCTTGCAACACTGGCCCCATGTGGTTCGAATAGGAGAAATGTCTAATCTTGTAATATCATCACGGAAGACGCCAACAGCTGGTCAGTCTGGCAAGAGGACTCTTTCATCAAAACCTGGAATCTACACCAAGTATAAGCCTTTCTTGAGTAGAGACAAGACAGTGCAGAGGAAGCTTAGCAAGGGGAACCACCCCAAGAGGCCCCCTGAAGTCCAGGAGCGCTATGTTGCAAGTCTGATGCCTCTTCAAAGAAGCATATCACCATGGAAGCACCCGCCGCGAATAAAGCCATTTGACGCCGAGGAATTCCTGACCACTCTGGAGCATTCCGGGCCTCAACTCACCTCTCGACTAAAGGGCAACTGGATCCAGCTTTACCGGAGATTCTTCCGAAGTCCTAATTTCGAGGGCTGGTTGCGGCATCGCCAACAGGAAATTACTCAGAAAATCGAGCTGCTTCATCTAGAGACTCTAGGCAACGCGGATGTCTTGGGCTGGGTCAAAGACAAGCAAGAGGTCGAAGTTGTTGACCTGTATCTTcaaataaaagagaaaatgACTTCCTGTTCCACATTCTATCCTCCCATCACACACGAGACAAGGCAACAACTGTCCAAGCACTTATCAGCCATCACAACAACGCTGCCCTCCGACCTGCAGTTTGTCCTTAGCAACAGCTGACGTCACACAGTATTTAGCGTCATATCTTAGTATCAACAGCTCACGTTCTGCCAATACTAAGCCACATAGCTTAGTAACTGTTGCTGATAAAGCTTCTGTCCGGCCTGCATTTCATCTATAGCAACAGCTGACATTGCTCCAGTGTTAAGCTAAATGTCTTAGTAACGATTTCTTGGTAACGCTATTGTTTTTCCTTAGAACATTTGGCGTTTCCACACCTGTATATTGCTGTGTACCTTTGTAACTATTGGTTGGTCAAAGTACCGTCCGACCTGCCGTTTGGCCATAGCAGAAGCTGTAGTATCTTTGTAACGGTTTCTTGACGACGCTGGTCCGTCGTCAATATTTGACCGCAACTGTCATGGAAACACTGGGTTCAAGTTCGACTCTTTGGTTTTTATTTCATAAAAAGGACGACCCTGTTCGTTTAGATTATGTTGCTTTGACCCTGCAACCAATCAAATAGCCGTACACAAAtccatgctcgaggatccagctctttatttttttcggcCACGAAAATCCTGCTCGGAAAATTACTTATGCACTTATGCGCTCCTTTGGGAGCGctcgcaaagtacgctggatcttcgagcTTGACACAAATTGCGTATAAATCAGCCTTAGATAGGCCGGATGATAGCATCACATCGTTGTGTTACATTAGTTGACGTGTTAAATTTAGTTGACATTGTATTACCATATTTAGGTTGATTTTCTATGAACCTTATCAATTGGTAAGTCAGCATTGTTATTTCCCTTAtagatatattatttatttattttttgtctctTAGGAAATTGGctttcttattattttctcaaatttaaaatataaatgtaaTATATTTTACAATTATTTTACCCATATTTTTATACACAAGTAATACAAATGTAAATATTGTATggtatgatgaattttgatgTACAGctacaaaaaaacaacttaGATTCTAA

Protein

Uniprot

Uniprot term	Description
Q8IWF6	Protein DENND6A OS=Homo sapiens OX=9606 GN=DENND6A PE=1 SV=1
Q5F3L4	Protein DENND6A OS=Gallus gallus OX=9031 GN=DENND6A PE=2 SV=1
Q8BH65	Protein DENND6A OS=Mus musculus OX=10090 GN=Dennd6a PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02141	DENN	DENN (AEX-3) domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037516	Domain	Tripartite DENN domain	Interproscan
IPR024224	Family	DENND6	Interproscan
IPR001194	Domain	cDENN domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13677	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005085	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0055037	Cellular Component	recycling endosome	Interproscan