Gene detail

Detailed information of XP_048580328.1 in Nematostella vectensis

Genomic Location: NC_064035.1:18063779...18071839
NR annotation: XP_048580328.1, uncharacterized protein C962.01 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_048724371.1

GTAACTTTAAGCTTACTAAGGAGACCTGTGTGGTCTTTAGAAAGAATCTTAGCATTTTGTACAAGACAAAAAGCTCGAGTATCAAGAAATCCGGCAAGATCTGCATTTCAGTGGTCTTCCGACCTGTGGTGACAGTGCGCAAGTCTGGAAAGCCGGAGTTACCAGGCGGCTTCCCTGAGGGTGAACCCCCAGACGAGAAATCTGGAAAAAGTGACGCTCGTGCGATGGAGCTTCTTCTCATGTCAGAGAGAGGTGCAATCCAGGTGTCCGTTTTACGTGGAAGAAACCTTGTTGCCATGGATATAACGGGAAAGAGCGACCCGTTTGTCACTCTTCGTGTCGGAGACCAAGAGAAGTTCCGCAGCCGAGTTCACCAGAAGACACTCAACCCCGTATGGATGGAGTCTGTAGCTCTTTCTCTACCTGCAGACGACGACAAGCTGTACCTGGATGTCTGGGATAAGGACGCTTTATCTCAGGAGAGGATGGGTTCGGTCACCTTCAACCCGAACACGCTAAAAGAGCTTGCAAAGGATCCGAGCGCACAGCAGTGGTTTAAGCTGAACAACACCAAGAGTGGGGAAGTGCAGCTGGCATTCCGGTATACCCCACCCGAGGAATGTAACATCGACGAGCTGAGTAACAGCTTCTCTGCGGGCGAAGTAGCGGAGGAGTTTGTCGGGCAACTGGAAGACCACGAGTTTGCTGAGCTCACCAAATCGCGAAAATCAGGTTGGAAGACGATGCTGAAAAAGCGCCGTGGAGTGTTTGGAATCTCATCTCGCATCAGCAAGAAGTCGTCACCAAACCCCCAGATCACTCTACAACAACCTACACACGACAGTCTCGAGGACGACGGGACCCAGTCCCCCAAGACCCAGTCCCTCAAGCCCCAGTCCACCAAGCCCCAGTCCCCCAAGCCCCAGTCCCCCAATATCCACAGGAGAGGCTCCCCTGCTAACAAAGGAAAGAGCTCTCGCCCCATTACCCCAAGAAAAGGTTCTCATTTCACTAGTAGCGGGAAGGGCTCTCGCCATTCCAGCCATGACGAGGACGACTCATCCGGGACGCCTCGGAAGAACTCAGGTCGCTCACTACCCGACAGGGACGACTATTGGTTAGCAGACGACGAGGGACAAGGAGATTCACCCGTGTCAAAAAACCCCAAGACCACCCTAGTGGCAAACGGTAAGTCGCCTTCGAATAAACGCAACCGGAAGGGCTCTCTCAAGTGCATCGGTGGCTTCTCGGACCAGACAGATGCGGACTTCTCCTACCTACCCGTCCAAGATTCCCCGAGTCCCAAACCACGGAAAGAGTCGCGTTGGAAAATGAAAAACTTAAAATCGAAGCCAAAGAGGCAGGGGAGCGTTAGCGAGAGCGAGGTAGATTCTGCCGTGCTAGAGGAGTCACGTGACTTGCTTGATGCATGGTTCGACCAAGAGGAGACAGAGTCCGCTGACCGCGCAAAatccaagaaaacatcagtcAAACACCCGAAATCATAACGGAGGACCACCGAGCGAAGTCCGGAGTGTAGGATATTGATTAAATGCCATGGTTAAAAGTTTTAAACGATAAAAACAAACTCGTTTGTTAATGGATCAATTTTGAATTTATCGCTTGAACTATAGTAAgctatttaaaaatcaaataaaacattagTTACAACAGATGTTTTCTCATCTAGTTCGCTTTTATTAGTTTTGAGTTTTGATCTGTAAAGTAAACcctatgaaatatgaatccgTCTCAGTCAATACAAAAATTAACCCGCCATTAACAgaaataagagaaagaaaacaaatgccCAGTAAAAGTCTAACATGATGACACTTTCACATTTTCAACGGAAATGTAATTCATCAAGTATTAGTCTAGTGTCTTTATTGACGTTCTGTCTTCACCTGTGTAAGTTATATGTTAGATGTGGTCGAATTTCTGACCTCTGTGTCGAACATATGCGATATTAAACGTTTAAAATACCATATTCAACTATTAGTATAAATTCCGATAACTAATTTTCCAGTTTATAGTTTTAACCCTCTTtaagaaatataagaaaaataattaaaagaaaaccaatAAAAGACCATTAAAATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8L7A4	Probable ADP-ribosylation factor GTPase-activating protein AGD11 OS=Arabidopsis thaliana OX=3702 GN=AGD11 PE=2 SV=1
P41823	Synaptotagmin-1 OS=Aplysia californica OX=6500 GN=SYT1 PE=1 SV=2
Q6XYQ8	Synaptotagmin-10 OS=Homo sapiens OX=9606 GN=SYT10 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001792 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168 all species →	C2	C2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR052455 all species →	Family	Tricalbin domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46980 all species →	TRICALBIN-1-RELATED	Interproscan

Gene Ontology

No Gene Ontology signature was detected for XP_048580328.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_048580328.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.