Gene detail

Detailed information of XP_048582001.1 in Nematostella vectensis

Genomic Location: NC_064037.1:8592857...8614900
NR annotation: XP_048582001.1, transcription initiation factor TFIID subunit 2 isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5504004

ATGAAGAAATCAGCAGATACACAGAGAAACTTTAAATTGATTCACCAGACTTTGTGCATAACTTCTATCGACTTCCAGCGAAGATGTCTATTTGGATTTGTGGAGCTTCGCGTGCTGCCACTCACAAGCAATTTGAACAGGCTCAAGCTCAACTGCAAGCAGTGCCGAATCATGAGAGTCTGTATACGAGAGGAAAAGAAAGAGGATTGGTATGAGGCAGGATTCCAGCTGGAAGATTCCAGTAGACCAGTGTGTCCTGATGGTAAAAAGCGAAATCTGGACTATTTTCTGGCATGCCAGCAAAATGCTGTTAGCTCTGCTGACCCTGATTACGGAGGAGGGGAGCTGGTTATCAGGATTCCAAAAGAGGTTCTTTCATGTGCCATGGAGCGCAAGCAGTTCCGTGTGAGCATTGAATACTCCTTGGAGCATCCAGATAGCGGCATCCAGTTTGTAACACCAAAGGGAGATGGGACTATGGCTCAGAGGGCAGCTCATTTGTTTACCTATACATATGCTAATTCATCAAGACTGTGGTTTCCTTGTGTTGATTCTTACGCTGAAGTCTGTACATGGAGTATTGACATCACAGTAGACAAAGACATGGTTGCTGTTAGCTGTGGAGAGCTTGTTGATCAGGTCTTTACTATTGATGAGAGACGAAAGACTTTCCATTATGCGTTGAATATACCAACTTCAGCTGTAAACATCGCCGTGGCTGTTGGGCCCTTTGAGATCTATGTTGACCCGATTATGCCAGAAGTGACAAATTTCTGCCTCCCTGGTCTTCTGGCAAATCTAAAGCATTCCACAGCATTCCTACATGATGTGTTTGAGATGTATGAGGAGAACCTCAGCTGCCGATACCCCTACACACATTACAAGCAGGTGTTTGTTGACCAGGCTTATAGCGTCAAGGCAGCTTACGCATCTATGTCCATCTTTAACACTAGTCTTCTACATTCATCACGCATCATTGATCAAACTTTCATCACAAGAAGGGTGCTGGCTCAGGCGCTAGCTGAGCAGTTCTTCGGCTGTTACATTTGCATGCAAGATTGGTCAGATGCTTGGCTTTGTTCAGGTATTGCTGGATATCTCTACAGTTTGTATGTCAAGAAAGCTTTTGGCAACAATGAATACAGATATTGGATCATGAAGGAAACAGAGTCAGTGTGTCAATACGAGACAGATGGCCCTGGACTCCCTCCCCTCCACAGTAACATGATAGAGAGCACTGCTAACCAGTCATCCAGCTCATCTCAAGACAGTCCCAGATCAGCAGCAGGCTCCTCCATACACCTACACCCACACCTAACCAGCGTCAAGCAGCGGGAAGTGGCATGGAGCAAGTCACACTTGGTGCTTAGGATGATTGAGATTAGGATAGGCCAGGAACCATTATTACAGGTTTTCAATAAGCTTCTATCTTTGGCAAACACCACGGCTCAACCTAAAGTTGACTCAAGTCTCTGGAGGAATCTTCTACTCTCTACTTCAGGATTCCTCAAGTCCATATCAACGGTATCTGGCAAAGATATAAATGTTTTTATTGATCAGTGGATATGTCACAGCGGTATTGCCAAATTCCATGGTAGTTTTGTGTTTAATAGAAAAAGAAATATTGTAGAGCTGGACATTAAACAGGATTTATCAAAAGGCACTGTGAAATATGTTGGCCCACTGACAGTCTGCGTGCAAGAGCTGGATGGCTCTTTTAATCACACTGTTCAGATCGAAGATATCACAAGCAGACATGAGCTTCCCTGTCATTCAAAGAGCAGGAGAAATAAAAAGAAAAAGATCCCGTTGATGACAGGCGAGGAAGTAGACATGAACCTTGATGCCATGGACTCTGATTCACCAGTGCTATGGTTAAGAATAGATCCGGAGGTGACATGGTTGCGGCAGGTCTCATTCGAGCAGCCAGACTACATGTGGCAGTACCAGTTACGCCACGAGCGGGACATCATGGCCCAAGTACAGTCTTTAGTGGCTCTAGAGAGGTTCCCAACGGCCCCTACGCGCGACGCCCTGATGGATATCATCACCCAGAAGGAGTGCTTCTACCGCGTGCGACAAGAGGCATGCATGTGTCTAGCCAAGGTCGCGTCTGCCAGCGCAGATTCCTGGACCGGACAGACTGCGATGCTGAACATCTTCAAGAACATGTTTGGCTCCAAGTCAGCGCCACAGATCATACGATACAACGACTTTTCCAACTTCATATCCTACTTCGTCCTTAAGACGCTACCGATAGCGATAGCATCTGTGAGAAATATCCACTCGCAGTGCCCTCGTGAGGTGGTGCTATTCCTCATGGATCTTCTCAAGTACAATGACAACAGACTCAATAAGTACTCTGACAGTTACCATCTCGCTTCGCTGATCGAAGCGCTATCTGCCACAGTTACCCCAGGTGTCGCCATGGTGTCCACTCAGAGTGACGGTAAGCTGTTGGTCAAGTTAAAGGACGACACCCAGCTCGTGCTCGCGGAGGTCATCCGGCGCCTGAACCTGGAGAAGCTCCAGCCATCCTACCGCTACTGCGTGACAGTCAGCTGTCTAAAAGCTCTTCGGAATCTGCAAGTGAATGGCCAAGTACCTGCTGACTCCGTTGCCTTTGAGTTCTACGCCGGATTTGGACACTTTGAAGACGTAAGATGTAGTGCTATCGAATGTCTTGCCGACTACACCAAAGTCGAAGTCAGCGAGAAAACTCTGAATTTTCTTATGGAAATCGTCGAAAAGGATCCGGTTCCTTACATAAGGCATCATACGCTTCGAGTGCTGAGTGACAACCCCCCATTCACGAGAAAGTCCGACTCGCCTCTCTGTACCCAGGTTCTTGTGGAACGCCTGTGGCATTTTATGTGCACGGTCCACGACTGGCGCTTACGCTGTGATGCTGTAGACCTGTACAGCGCGTTGTTTGGTCGTCTAACACCATCGTGTGTACCATCACAAGGGATGGGAATCGTGATTGACCTGAAGGAGAAGAAAATAATGAATCTTTCGCCACTCCCTTCCTCGGGATCACCGCGAGGATCAGTGAGCGGTGAGGAGTCGACCGCTTCTCGGAAAAGCCACAAGCGCAAATCACGCGCTGTATCCCCCACAGATTTCGACTCACAGCCAGACACTCCAAAGAGCTTCGAGTCTGCATGCTCAGACAACAGCAAACTCAAGCTAAAAATCAAGCTCGAGAAGGAGGAGGGTGGAGTGGACAGTGGCGCGGAGCAGCGAATGAAAGAAGTTGAGGCTGCCATGAGTGAGATCCGAAAACACAAGAAAAAGAAGAAGAAACACAAGCACCGAGACGAGAAGGGCAAGCGAAAGATGAGCACCAGTAGCAGCAACTATGACTCGCCACTCATGTTCGACCACTCCATGCAGTAA

Transcript

rna-XM_048726044.1

AAATATACCGCGAGAGACTAGGACTACAgaagaatccaagatggcggctaggGAAGCATTGAAAGCTCTAGTCAAGAAAGATCGCTAAACTACTAGGCGAACAACATGAAGAAATCAGCAGATACACAGAGAAACTTTAAATTgaTTCACCAGACTTTGTGCATAACTTCTATCGACTTCCAGCGAAGATGTCTATTTGGATTTGTGGAGCTTCGCGTGCTGCCACTCACAAGCAATTTGAACAGGCTCAAGCTCAACTGCAAGCAGTGCCGAATCATGAGAGTCTGTATACGAGAGGAAAAGAAAGAGGATTGGTATGAGGCAGGATTCCAGCTGGAAGATTCCAGTAGACCAGTGTGTCCTGATGGTAAAAAGCGAAATCTGGACTATTTTCTGGCATGCCAGCAAAATGCTGTTAGCTCTGCTGACCCTGATTACGGAGGAGGGGAGCTGGTTATCAGGATTCCAAAAGAGGTTCTTTCATGTGCCATGGAGCGCAAGCAGTTCCGTGTGAGCATTGAATACTCCTTGGAGCATCCAGATAGCGGCATCCAGTTTGTAACACCAAAGGGAGATGGGACTATGGCTCAGagGGCAGCTCATTTGTTTACCTATACATATGCTAATTCATCAAGACTGTGGTTTCCTTGTGTTGATTCTTACGCTGAAGTCTGTACATGGAGTATTGACATCACAGTAGACAAAGACATGGTTGCTGTTAGCTGTGGAGAGCTTGTTGATCAgGTCTTTACTATTGATGAGAGACGAAAGACTTTCCATTATGCGTTGAATATACCAACTTCAGCTGTAAACATCGCCGTGGCTGTTGGGCCCTTTGAGATCTATGTTGACCCGATTATGCCAGAAGTGACAAATTTCTGCCTCCCTGGTCTTCTGGCAAATCTAAAGCATTCCACAGCATTCCTACATGATGTGTTTGAGATGTATGAGGAGAACCTCAGCTGCCGATACCCCTACACACATTACAAGCAGGTGTTTGTTGACCAGGCTTATAGCGTCAAGGCAGCTTACGCATCTATGTCCATCTTTAACACTAGTCTTCTACATTCATCACGCATCATTGATCAAACTTTCATCACAAGAAGGGTGCTGGCTCAGGCGCTAGCTGAGCAGTTCTTCGGCTGTTACATTTGCATGCAAGATTGGTCAGATGCTTGGCTTTGTTCAGGTATTGCTGGATATCTCTACAGTTTGTATGTCAAGAAAGCTTTTGGCAACAATGAATACAGATATTGGATCATGAAGGAAACAGAGTCAGTGTGTCAATACGAGACAGATGGCCCTGGACTCCCTCCCCTCCACAGTAACATGATAGAGAGCACTGCTAACCAGTCATCCAGCTCATCTCAAGACAGTCCCAGATCAGCAGCAggctcctccatacacctacACCCACACCTAACCAGCGTCAAGCAGCGGGAAGTGGCATGGAGCAAGTCACACTTGGTGCTTAGGATGATTGAGATTAGGATAGGCCAGGAACCATTATTACAGGTTTTCAATAAGCTTCTATCTTTGGCAAACACCACGGCTCAACCTAAAGTTGACTCAAGTCTCTGGAGGAATCTTCTACTCTCTACTTCAGGATTCCTCAAGTCCATATCAACGGTATCTGGCAAAgatataaatgtttttattgatcaGTGGATATGTCACAGCGGTATTGCCAAATTCCATGGTAGTTTTGTgtttaatagaaaaagaaatattgtAGAGCTGGACATTAAACAGGATTTATCAAAAGGCACTGTGAAATATGTTGGCCCACTGACAGTCTGCGTGCAAGAGCTGGATGGCTCTTTTAATCACACTGTTCAGATCGAAGATATCACAAGCAGACATGAGCTTCCCTGTCATTCAAAGAGCAGGAGaaataaaaagaaaaagatccCGTTGATGACAGGCGAGGAAGTAGACATGAACCTTGATGCCATGGACTCTGATTCACCAGTGCTATGGTTAAGAATAGATCCGGAGGTGACATGGTTGCGGCAGGTCTCATTCGAGCAGCCAGACTACATGTGGCAGTACCAGTTACGCCACGAGCGGGACATCATGGCCCAAGTACAGtCTTTAGTGGCTCTAGAGAGGTTCCCAACGGCCCCTACGCGCGACGCCCTGATGGATATCATCACCCAGAAGGAGTGCTTCTACCGCGTGCGACAAGAGGCATGCATGTGTCTAGCCAAGGTCGCGTCTGCCAGCGCAGATTCCTGGACCGGACAGACTGCGATGCTGAACATCTTCAAGAACATGTTTGGCTCCAAGTCAGCGCCACAGATCATACGATACAACGACTTTTCCAACTTCATATCCTACTTCGTCCTTAAGACGCTACCGATAGCGATAGCATCTGTGAGAAATATCCACTCGCAGTGCCCTCGTGAGGTGGTGCTATTCCTCATGGATCTTCTCAAGTACAATGACAACAGACTCAATAAGTACTCTGACAGTTACCATCTCGCTTCGCTGATCGAAGCGCTATCTGCCACAGTTACCCCAGGTGTCGCCATGGTGTCCACTCAGAGTGACGGTAAGCTGTTGGTCAAGTTAAAGGACGACACCCAGCTCGTGCTCGCGGAGGTCATCCGGCGCCTGAACCTGGAGAAGCTCCAGCCATCCTACCGCTACTGCGTGACAGTCAGCTGTCTAAAAGCTCTTCGGAATCTGCAAGTGAATGGCCAAGTACCTGCTGACTCCGTTGCCTTTGAGTTCTACGCCGGATTTGGACACTTTGAAGACGTAAGATGTAGTGCTATCGAATGTCTTGCCGACTACACCAAAGTCGAAGTCAGCGAGAAAACTCTGAATTTTCTTATGGAAATCGTCGAAAAGGATCCGGTTCCTTACATAAGGCATCATACGCTTCGAGTGCTGAGTGACAACCCCCCATTCACGAGAAAGTCCGACTCGCCTCTCTGTACCCAGGTTCTTGTGGAACGCCTGTGGCATTTTATGTGCACGGTCCACGACTGGCGCTTACGCTGTGATGCTGTAGACCTGTACAGCGCGTTGTTTGGTCGTCTAACACCATCGTGTGTACCATCACAAGGGATGGGAATCGTGATTGACCTGAAGGAGAAGAAAATAATGAATCTTTCGCCACTCCCTTCCTCGGGATCACCGCGAGGATCAGTGAGCGGTGAGGAGTCGACCGCTTCTCGGAAAAGCCACAAGCGCAAATCACGCGCTGTATCCCCCACAGATTTCGACTCACAGCCAGACACTCCAAAGAGCTTCGAGTCTGCATGCTCAGACAACAGCAAACTCAAGCTAAAAATCAAGCTCGAGAAGGAGGAGGGTGGAGTGGACAGTGGCGCGGAGCAGCGAATGAAAGAAGTTGAGGCTGCCATGAGTGAGATCCgaaaacacaagaaaaagaagaagaaacacAAGCACCGAGACGAGAAGGGCAAGCGAAAGATGAGCACCAGTAGCAGCAACTATGACTCGCCACTCATGTTCGACCACTCCATGCAGTAACTAGATGCAGTAACTAGACATGACTCGCCACTCATGTTCGACTACTCCATGCAGTAACTAGACATGACTCGCCACTCATGTTCGACCACTCCATGCAGTAACTAGATGCAGTAACTAGACATGACTCGCCACTCATGTTCGACTACTCCATGCAGTAACTAGATGCAGTAACAAGACATGACTCGCCACTCATGTTCGACCACTCCATGCAGTAACCAGACATGACTCGCCACTCATGTTCGACTACTCCATGCAGTAACTAGATGCAGTAACTAGACATGACTCGCCACTCATGTTCGACCACTCCATGCAGTAACTAGACATGACTCGCCACTCATGTTCGACCACTCCATGCAGTAACTAGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6P1X5	Transcription initiation factor TFIID subunit 2 OS=Homo sapiens OX=9606 GN=TAF2 PE=1 SV=3
Q5ZIT8	Transcription initiation factor TFIID subunit 2 OS=Gallus gallus OX=9031 GN=TAF2 PE=2 SV=1
Q8C176	Transcription initiation factor TFIID subunit 2 OS=Mus musculus OX=10090 GN=Taf2 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002730 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01433 all species →	Peptidase_M1	Peptidase family M1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014782 all species →	Domain	Peptidase M1, membrane alanine aminopeptidase	Interproscan
IPR027268 all species →	Homologous_superfamily	Peptidase M4/M1, CTD superfamily	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR042097 all species →	Homologous_superfamily	Aminopeptidase N-like , N-terminal domain superfamliy	Interproscan
IPR037813 all species →	Family	Transcription initiation factor TFIID subunit 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15137 all species →	TRANSCRIPTION INITIATION FACTOR TFIID	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008237 all species →	Molecular Function	metallopeptidase activity	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0000976 all species →	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0003682 all species →	Molecular Function	chromatin binding	Interproscan
GO:0005669 all species →	Cellular Component	transcription factor TFIID complex	Interproscan
GO:0006367 all species →	Biological Process	transcription initiation at RNA polymerase II promoter	Interproscan
GO:0016251 all species →	Molecular Function	RNA polymerase II general transcription initiation factor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03128	TAF2; transcription initiation factor TFIID subunit 2	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_048582001.1 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

37TPM > 0

16Conditions

8.0Max TPM

3.5Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	5.40	6.05
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	4.17	6.64
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	3.29	4.34
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	3.05	3.37
whole 6 week old aboral regenerate · regenerate uncut	3	3	3.33	3.96
whole 6 week old aboral regenerate · regenerate 4hpa	3	1	1.14	3.43
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	3.67	5.98
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	5.44	6.12
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	3.38	6.38
whole 6 week old aboral regenerate · regenerate 20hpa	3	2	3.56	5.80
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	3.89	4.94
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	3.87	6.79
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	4.96	5.77
whole 6 week old aboral regenerate · regenerate 48hpa	3	1	2.68	8.03
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	3.44	5.69
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	1.41	4.24

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	6.05
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	5.62
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	4.54
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	6.64
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	3.32
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	2.54
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	4.34
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	3.17
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	2.36
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	3.37
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	3.31
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	2.47
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	3.96
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	3.63
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	2.39
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	3.43
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	5.98
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	5.02
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	6.12
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	5.14
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	5.05
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	6.38
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	3.76
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	5.80
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	4.87
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.00
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	4.94
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	3.78
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	2.96
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	6.79
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	4.83
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	5.77
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	5.55
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	3.56
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	8.03
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	5.69
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	4.64
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	4.24
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.