Genomic Location: NC_064037.1:15622623...15639085
NR annotation: XP_048582423.1, PHD finger protein 12 isoform X2 [Nematostella vectensis]
| CDS | |||||
| LOC5516092 | |||||
| Transcript |
| rna-XM_048726466.1 |
| Protein |
| XP_048582423.1 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| Q5SPL2 | PHD finger protein 12 OS=Mus musculus OX=10090 GN=Phf12 PE=1 SV=1 | ||||
| Q96QT6 | PHD finger protein 12 OS=Homo sapiens OX=9606 GN=PHF12 PE=1 SV=2 | ||||
| Q09819 | Uncharacterized protein C16C9.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC16C9.05 PE=1 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|PHD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16737 | PHF12_MRG_bd | PHD finger protein 12 MRG binding domain | Domain | Interproscan |
| PF00628 | PHD | PHD-finger | Domain | Interproscan |
| PF00498 | FHA | FHA domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR031966 | Domain | PHD finger protein 12, MRG binding domain | Interproscan |
| IPR000253 | Domain | Forkhead-associated (FHA) domain | Interproscan |
| IPR019787 | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR038098 | Homologous_superfamily | PHD finger protein 12, MRG binding domain superfamily | Interproscan |
| IPR008984 | Homologous_superfamily | SMAD/FHA domain superfamily | Interproscan |
| IPR001965 | Domain | Zinc finger, PHD-type | Interproscan |
| IPR019786 | Conserved_site | Zinc finger, PHD-type, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46309 | PHD FINGER PROTEIN 12 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0000122 | Biological Process | negative regulation of transcription by RNA polymerase II | Interproscan |
| GO:0003714 | Molecular Function | transcription corepressor activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0070822 | Cellular Component | Sin3-type complex | Interproscan |
| GO:0140110 | Molecular Function | transcription regulator activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K26244 | PHF12, RCO1; transcriptional regulatory protein PHF12/RCO1 | - | Chromosome and associated proteins | ko03036 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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