Gene detail

Detailed information of XP_048582544.1 in Nematostella vectensis

Genomic Location: NC_064037.1:17166092...17168471
NR annotation: XP_048582544.1, uncharacterized protein LOC125561877 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_048726587.1

ATGAATGATCCTCTCGTCGATATCTGGCTCATTACAGGAAAGGATGGAAGAATTTTCTCCGCTCATTGCCTGGGCTGTAAGGCAGGACTAGCGGAATCGTGTTCACACATTGCCAGTGTCTTATTTTATATCGAATGCTGGACTCGAATCAACGGAAAGCTGGCTTGTACGCAAGTAAAATGCTCATGGCTCCTTCCAACTTATGTAAGTAATGTGGCCTATGCTAGGGCAAAAGAAATCGATTTTTCTTCTGCTAaaaagttaaaagaaaaacttgaCGATAACATTGAATCTTTTAATGAATATTCTCAATCTCGAACTGTTGGAGACGCAACGAACAAGATCACGACCCGGAGCGGAGGATGTGTCGGAGTTTTACAAAAAGCTGAATCAGTGTGAAACAAAAGCTTCAATATTAAGTTTGATCGACCCATATGCCAATCAATTTATTTCAAAAAGCAGAAACATTCCAGTTTTAACAGATCTTTACGAATCAAATAATTTAGATCTGAAATACCCCGAACTTTTACGGAAATATTTAGAAGTTAAGATAAACATTTCAGACGAAGAGATTGACATCGTCGAACAGGACACGCGCACTCAAGCTAAAAGTCCAGGATTTTTTAGGCATCGTGCTGGCAGAATTGGAGCCTCTGTCTGTGGTGCTGTGTTCCATGGAAATCTTGCACAGCCTTCTCAAAATCTAATTTAGTCTATCTGCTATCCGCAtctatttaaaataaacaacaagGCAACCAAACATGGTTGTAAATACGAGGAACAAGCTATCAAAAGTTATGAACACCACATGAAATCGCTACACACCAACTTTCAAATTAAAAGATGTGGACTTTTCATAAACAAAGACTTTCCTTTTATACATGCTACACCAGATTTTCTAATATCGTGTGACTGCTGTGGATTGGGCTGCGGGGAAGTTAAATGCCCCATTTCCGTCACAAATGGTAACTTCAACGAATACAGCCTGAAAGCAAGCTCTTGCCTCGAAAATGTGAATGGAGTATTAAAGTTAAAGAAATCCCACAACTATTACTATCAGGTACAGCAGCAGCTATTTACATTGCCTGATCGAAAGTATTGTgactttgttgtttttgccaTTGATTCTGATGGGAACTCACATGTTTTATGTGATCGAATCAACCCTGACCCATCCCACTCAAGCGGTGTTATGAAAAAGATCGAAACATTTTGGAGAATTTGCATTCTTCCAGAAATGCTTGGAAGATGGTACACCAGACGGTGTGATCTACCTGAAAGCAAACTCATTGATAATGTCATATGTTTTTGTAGGGGACAGCCTAATGATGACATTGTATCCTGTACCAATGCTGACTGTCCATATGGACAATTCCATACTAAATGCCTTTCTTTACATAATGTGAAAATGCCAAAGCAATGGTACTGCCCTCACTGCTGTAAACTACCACAGCTCAAAAAACGGGCAAAGGCTAAAGTTGCACCATCTCAGGTAAACCAGGCTGCTATGTTAAAAACTACAATTTGTATCTGTAATGAAAAGGCAACCATGACTGATAGACTCATTGAGTGCCACAATGTAAACTGCAGCAATGGAAATTTCTTCCATCTGAAATGCTTGGGGTTGAAAAGAATGCCTAACAATTCCAAGACAACATGGCTATGTAATATCTGCCGAGGAAAAAAGGGCAACACAATGCCTTGTGATAAACCTACCACTTCTACTTCTACAACACCTATTACAAATCCTAAATCACCTGCAACAACATCAAACTTatcagatgatgatgatagtgaagATGAAATAGAAATTACAAAAGTGTCAACTAGTTCTGGTTCTGTTAACAAGTATGCTATTCTGGCTAATTTAAACAATGCAGATTATGACATCATTAGTGATCCTGCTGGATGGCTTACTAGTGACATTATCCAATATGCTCAAGTCCTGATAAAAGAAGTTAACCCAGCAATTGAGGGCTTACAACGACCAACTCTTGGAAGAGTCAGAAACTTTGATGTAGTGTCTAGTGAATTTATTCAGATTCTACACACTGGAAGTGATCACTGGGTCTGTGTTAGCTCACTGGGCTGTCCACCTGGATATGTTCACCTGTATGATAGTTTATATCATGATGTTATAAGTCAAGAAATAGAGGAACAAACCAATGACCTCCTAGGTGGAAGTTTGATTAGTTTAGATTTTGTACCCGTCCAGCAACAGAGCAATGGTAGTGACTGTGGGTTTTTTTCTATTGCATTTGCCACATGTTTAGCTTTTGCTACTAATCCAAGTCACTTTACTTTTGACATTCCCAAAATGCGCTCACACTTATTATCATGTCTCAAAGATGAGACAATTAGCATGTTTCCATCCTTCTAA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|PHD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02902	Peptidase_C48	Ulp1 protease family, C-terminal catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001965	Domain	Zinc finger, PHD-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan
IPR011335	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR003653	Domain	Ulp1 protease family, C-terminal catalytic domain	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR011604	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47526	ATP-DEPENDENT DNA HELICASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008234	Molecular Function	cysteine-type peptidase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22371	G2H3; G2/M phase-specific E3 ubiquitin-protein ligase	EC:2.3.2.26	Ubiquitin system	ko04121	deepkoala