Gene detail

Detailed information of XP_048582709.1 in Nematostella vectensis

Genomic Location: NC_064037.1:15234215...15247602
NR annotation: XP_048582707.1, cell cycle checkpoint control protein RAD9A [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_048726752.1

GAAGCTGAGCCCGCGAATATTtggcgccattttgaatttgcAAGCCACTTTGTAATaacttgatgtttttttttacgatgTTTTAAACTAAAACTGGAGAAAACGATGATATTCAGCTAGCTACTTAAAAATGCGGGGTATCATACCCGGTAGGGCCGTGAAATCGTTTGCTAAAGCGGTTCACTGCCTTTCTAAGATAGGAGAGGAGCTTTATCTAGAAGCGTTACCAGATGGGATTGCCATTCGCACTGTCAATCAGTCTCGATCTGCTTATGCTTGCTTCATGTTTCACTCCTGTTTCTTCTTGAGCTATGATGACGGAAGGGATGAGCTCCCAGACAGCTCTCAGGTTGATGACATGGTCAAGTGTAAGATTGCCATGAAGTCCTGTCTGTCAGCATTCAAGTCTGTGAACACACTGGAGAAGTCAGTGGACAAATGTCAGATTGACCTGAGCATCAAGGAGGCAAGGcttgttttccttttctaCTGCAAACATGGTATCACCAAGACCTATAACCTTACTTTTCAAGAATGTGAATCTTtgcaagctgtctttacgaaAGACCTCTGCCCCAACTTCATCTCAGCTCAGGCCAGGTTGCTAAATGAGACAGTCTACAATTTTCCCAACAATCTGGATGAGCTCACATTATCAGTGAACCCTGAGTTGCTGAAAGCCACAAACTACGCAGAGGATGAGCCAGatCCCAACAAAGTCATCCGCACAGAGATGACCCTAGTTCCTGATGAGTTTGATAATTACCAGATTGGTGTGGACACTGATGTCACCTTTTGCTTAAAGGAGTTAAGGGCCATTTTATCATTTGCTGAGTTTGCTGGCTACCCTGTCAATATCCATTTTGAGACAGCTGGCAAGCCAATAGTGTTCAGTCTGGATGCAGAGCCGTCATATGAGGCTGACTTTGTACTTGCCACCCTTGTCGACCAGCCTGTTTCAACCCAGTCATCACAGGTCTCCATGGCAGCATCAAATGCCAAAAGCGTTGGGAACAAGGGCAAAGGAAAGAAGACTGAACGAAAAGAAACAACTTCACAGAATATACCAAACGGCAAGCCAAAGCCAGATGAAATGTTATCCTCAAAGCAGAAAGTTTCCAATTCACCTTCAAAAGCACCAGAAAGACAGAAATCCCAGACTAATCACTCACAGCGATCTGCTGCTAGGAAAAATAGTAGCAATGGTAATGGCAGTGCTGCAGATGAGGATAGGAGAGATGCTGATTGCCAAATTGCAGAGAAGGAGAAGCAAGCAAGTGGTAAGAAGCTCAATAAAAGTGCTGCTGATGTGGAAGATTTTTTCAGTGACTCCTTTCCGTATCAAGATAAATTCAGTAAAAAAGCCAAGAACTTGTCTGTTATTCCTGAGCAGAGTCAAGAAAACTGTTCATTCCAAGGGAGTGCACCTTCAATTAGAACTCCCCCTAGTGTGGCCACAGATGCATCATTTCTTCGACATGCTGAAATGCCATCTATTGGCGAGGATAGCCTGAATGTGGAAAGTCCCAACACTGATAGATCACAAGTAAGGAAACTGTCAAGAGAATCTCTTGATTTGGAGCTGTATGATGAAGACCAGGATGACGTTTTACCAGCTACACCACCCTCTAAAAAGTTCAAGTCCATGTTTTTCGGAGCCTTTTCTGATGTCAAATCCCAGCCTCAGCCACCAGGCTCAGTTCTTGCTGCTGATACAGATGATGAAGATTCAAGCTGACAAAAGGAACAGTGAGGTTACAGTGACAAGCTGACAAAGTGAGGTCTACACATTACGCTGACAAGCTGACAAAGTGAGGTCTACATATTACGCTGACAAACTGACAAAGTGAGGTCTACATATTACGCTGACAAAGGGAGGTCTACATATTACGCTGACAAAGGGAGGTCTACATATTACGCTGACAAGCTGACAAAGTGAGGTCTACATATTACGCTGACAAGCTGACAAAGGGAGGTCTAAACATTACGCTGACATAGGGAGGTCTACACAAGGACAGGTCTCCTACAAGCTAATGGAACAATGCAAACAACAAATCAAGTAAGCAACAACAGCTTCTGTCCTTCCTTCTTCCAACAAGAGACCCTTTTCTGTGTTCACTTGTGGATTTGGGGTTGGGTCATGATTTAAACACAGTCCATCAAAGGATTTCTTAACATCCTCTAACCTTGTAGATTTCTGGTTAGTGGTTCCTAAAGTTCACCCTATATTGTCTGCTTTTATGTAGATCCAAGACAATTTAGCATGTAATTTATTAACAGctgtttgaagaaaaacaaaactgtgttatttttataaattattCCATTATAACAAACTGTAAATATAGGAGCTCTATGCAAACTATattgtaaaaataatttatatagGATAAGCAGGTCACAAATTGTTGTTGTCAGTGTTGAAAGTATAACACCATTAGAAATTTGTATTACGTGGCATTCATAAATTCTGACTTttatacaaataaataaaatctgcTGCGTTA

Protein

Uniprot

Uniprot term	Description
Q9Z0F6	Cell cycle checkpoint control protein RAD9A OS=Mus musculus OX=10090 GN=Rad9a PE=1 SV=1
Q99638	Cell cycle checkpoint control protein RAD9A OS=Homo sapiens OX=9606 GN=RAD9A PE=1 SV=1
Q4R5X9	Cell cycle checkpoint control protein RAD9A OS=Macaca fascicularis OX=9541 GN=RAD9A PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04139	Rad9	Rad9	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026584	Family	Rad9	Interproscan
IPR046938	Homologous_superfamily	DNA clamp superfamily	Interproscan
IPR007268	Family	Rad9/Ddc1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15237	DNA REPAIR PROTEIN RAD9	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000077	Biological Process	DNA damage checkpoint signaling	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0030896	Cellular Component	checkpoint clamp complex	Interproscan
GO:0000076	Biological Process	DNA replication checkpoint signaling	Interproscan
GO:0031573	Biological Process	mitotic intra-S DNA damage checkpoint signaling	Interproscan
GO:0071479	Biological Process	cellular response to ionizing radiation	Interproscan