Gene detail

Detailed information of XP_048582944.1 in Nematostella vectensis

Genomic Location: NC_064037.1:6833151...6840431
NR annotation: XP_048582944.1, deoxyribonuclease-1 isoform X2 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_048726987.1

AAATTTAGTAAGCTTTGATATAACGACAACTGTCTAGTCGTTTCCCCAAACATAACAGACCGTGATTGGCGATACGCATATGTACACAACAAactaaaatcttaaaaaaggATCAAAACTCATAGCCGGTTTTACAAAGGAACACAACATGAGCTTTATCAACGCAATCCTGCTTGTTTTTGCGTTTTATTTGTTGGTTCGACCCTTGGAAGTAGAGGCATATGTCAAGAACAttctaaaaaatgaaataagagCACCGCTGGACAGACAGGATGCGGGCTCTGGTCAAGTGGCGCATAACTTGAAAATTGGAGCTTTCAACGTCCAAGTGTTCGGAGTGAGAAAGATGGAAGTCCCAGGTGTTGCCGAGATACTTGTCAAGATTCTGTTGCGTTATGATATCGTGCTGATCCAGGAAATCAGAGATTCGTCTCAGACTGCCATGCCCACTCTGTTACAGAGACTGAATAAggAGGGAGGCAGAGCATCTGCGCACACATATGACATGACCATCAGCGCAAGACTGGGGCGAACCACTAGCAAAGAGCAGTACGCGTTTGTTTACAGGTCTGAATTGTTTTCGGTGGTGCGTACATATGTTTACAGTGATCCTAAGGACTTATTTGAACGAGAGCCATACATCGTTCATTTCCGCTCTTTCGTGACAGCCATCAAAGATTTGGTATTCGCGGGAATTCATACCAAGCCGTCACAAGCCGCGGCTGAAATCGATCATCTTGTTGACGTCTACGATGATATCAGAGACCGCTGGGGaatggatgacgtcatcattatgGGAGACTTCAATGGCGCATGTGACTACGTGAAAGACAGTGAGCGGCGGGTTAACAGGTTGTTTACTGACCATAGATTCAGCTGGCTCATCACCGACTGCGTTGACACGACAACGGGCGGGGGCGCATGCGCTTACGACAGGTTTGTTGCCGCTGGCGCATCTATGATGTCAGCGGTTGTACCAGGAAGCGCTGGTCGATTTGCGTTTGACAAAGTATATGGACTATCAGAGGCGATGACCGGCGACGTCAGTGATCACTACCCAATAGAATTGGAAATATACTCAAAAGCTTATGTGGATGCTGTGGCTAAGGTTAATGAGAAGACGGAGAGCAAATTCTTTGCCATCACCCCACTCGGCTTTGATCCTACAAACATCTACTCGCTGCGCCATAGTGACAACCCACTCGTCAAGAACGGGTTCCAACGGAGCACCCTCTACATCAAAAGAGCTATCGCCATTGTTACCAACGTAAAGACGGTCAGCtcttcccatgatgcagtgcaagCATTTGAGCTTGTCTACAAAAGCTGGCCGTCCCTTGTTCGCAGGAGCCAGGTTGAGCTTGCAAAGCTGAAGGCCGCCGAAAAAATGGGAGCGAATGATAGAGCTACGGTCAAGCTAGTGTGCAGGAAAGTGCCTGCCCCAGCGGAATGCTGGGTAGCCCTCGAGATGTGATCGAGTGACCCACTATGTAACACAGGAAAGTTTAGAAGTTAAAAGTGGCCAACCACAGAATAATAGACAAGGTTACTgcattttataaaacaaatcaAGAGCTAGAATTTTCCCATAGCCACCTCCATGCCCACTCCATGCAAGATGATACAGTGCAACACCCTTAAGATAAAGGGCCCTGCTCCTACCACCCCTTTTGGAATAAAAAGGAAGCCCTGAAAATTTGACCAGTTTCGCGATATATTGAACAATAATGTTTTCataattttgtaataaactccgCCTCTTAGGCGTTTAGAGGGCATAGGCTAGCAGATCAAATGCACGGCAGATCTGGAACCATAATATAATAAAACTTAGAAAAACCAAAATGTGTTGGCCTGTAATTGTCtgtaataaaataaaccaGTTTGTAATAAACTTGACCCATTTTGTGATAAAATAGACCcatttttgtaataaacttgacccattttgtaataaccttggcccattttgtaataacctTGACCTGTTTTGTAATAAAGtcgacccattttgtaatcaa

Protein

Uniprot

Uniprot term	Description
P00639	Deoxyribonuclease-1 OS=Bos taurus OX=9913 GN=DNASE1 PE=1 SV=3
P24855	Deoxyribonuclease-1 OS=Homo sapiens OX=9606 GN=DNASE1 PE=1 SV=1
O55070	Deoxyribonuclease gamma OS=Mus musculus OX=10090 GN=Dnase1l3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016202	Family	Deoxyribonuclease I	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11371	DEOXYRIBONUCLEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000737	Biological Process	obsolete DNA catabolic process, endonucleolytic	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0004530	Molecular Function	deoxyribonuclease I activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006308	Biological Process	DNA catabolic process	Interproscan
GO:0004536	Molecular Function	DNA nuclease activity	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11994	DNASE1; deoxyribonuclease-1	EC:3.1.21.1	Enzymes with EC numbers	-	deepkoala