Gene detail

Detailed information of XP_048583155.1 in Nematostella vectensis

Genomic Location: NC_064037.1:18408756...18494700
NR annotation: XP_048583155.1, mediator of RNA polymerase II transcription subunit 23 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5506452

ATGGACCACAAAGTGCTATTACGGGCGATTCTCGATAGCGCGTTGAAAATTGAACCAATCGAAACCGCTTTTTCAGGCTGCTTGGTACAGAAAGAAAGTGACAATGTTGATGTCGAGGCATTATTTCTCAAGCTGTTCAAGCCATTTTGGGTGAAGCTTCCAGCAGAGTCCCGCGAGACTATCCTAACAGAGTTTGTGGCCTACATTCATCAGCAGAATAATCTCAGAAGAATAGAGTTATGTTTTGGTTTGCTTGCAAGTCTTGTTGCAAATAGTGTAGTATTACCAAGGTCTGTGTGTGAGGCTGTTTTGAAGTCAGAGCATCTGAAATTTGATGATGAAGTTAAATGGTGCAAATCATTTCAACTTTTAAGGGTAATTTCAGGCGGTACTGACTACAAGGGCTGCCGAGATGTACTTAGTCTTGTTTTTCAAAAATTTAATTTGATTCCAAAAGAGCCAGACCCAGCCTATACAGACCGCATAGAATGTGCAGTAAAGGTTGTACAGTATATACTTGACAGGAAAGCCTGTCTTCTTCCAGCCTACTTTGTAATTAATGAGATCTTTAAAGATTTTCCTGAAGGGAAGGCAACCCCACATTGGTCTCTGAGCAAGCTTCTGTCCGATTATGTAGACAGCTTCCGACCTCTTGCTCACATGGTTACCGTCACGGGCCGTCCACTGCTCCTGCCAATCATTGGGCATCCCAGCTCATCTATTGGTGTATGGAAACTGGATCCGGCAACACTCAGCTTCCCCATGAAGGGCTTGCTCCCCTATAACAAGAGTTTATTCAAGCCTCAGAAGAACCTTCTCCAGTACGTTATTGGTCAGCCTTATTCTCGTGAGATCATTTGTTCAATGCTGGGGCTGAATAAACAGCAAAAACAGCGCTGTTTGGCGCTCGAGGAACTTCTCGTGGACCTTATCGTCATCGCCATGGAGAAATCTGAACACGACCAGTCGGGACTTGATGACACTGCCTGTCAGTTGCTATGGCAACACCTATCCAGCCATCTCATCTTCTTCGTGCTGTTCCAGTTTGCGAGTTTTCCACACATGGTGCTAGCGCTTTATGACAAGTTGCAAGGCCGTAACTTGCGTCAGGGCAGAGATCATCTTATGTGGGTTCTCCTACAGTTTATATCTGGAAGCATCCAGAAAAATCCGATTAGTGACTTCAAGCCAGTAATAAAACTCTTTGAGTTACTGTATCCTGGGAACGAGCCTCTACCAGAGCCAGATATAAATCATGCAGATTCCATCCACTCACTGGCAATGGCCTGTATTTGGATACATTTGTCGAAAAAGGCTGAAGGGGAAAACATCAAGTTCCCGTTTTCAACTTGTCACACCCTCCGCAAACAGCTAGAGTATATTGAAAAGTGCTCTGCAAGCAAACCAACCGCGTTATCATCTTCAAATTTCACGATTCCTTTACTGTGCAATGCCTATAGCACGATACCGAACAAGTTTACTGTGGCTATGTCAGTCCTGGTCGAGATGTGTTTTGGAAATGGTAAACCCAGTACCCCCCTTCCTGGCCCGTCCAACACTGTCGCCGCAAGCCCGACCGTACCATGTCCTCTTAGCCTGCTGGATTCGCTTTCAGTGCACGCTAAGATGAGTCTTATTCACAGCATCGTTGCGCGTATTATCAAGATGGCCACATCTGGGACCTCTCTGGCATTAGCGCCAGCTCTCGTGGAGACGTACAGTCGTCTTCTGGTTTACATGGAGATAGAATCACTCGGAATACGGGGATTCATCAGTCATCTTCTGCCAAATGTGTTCAAGAGTCAAGCATGGGGCATCCTGCACACCCTGCTAGAAATGGTCAGCTATAGACTACACCATATTCCGCCAAACTACAGGGTCACTCTGCTATCTCACTTGCACACCATAGGGGCCGTCCAACAAACCAATCATAACCAGCTAAACTTGTGCGTTGAGAGTACCGCTCTGCGCCTGATAACAGGGCTTGGTAGCTCTGAGGTTCAACCGCAGCTTTCCAAGTTCATAGCTGAACCCAGACAGATCTTGTCTGCGGAATCCGAAGAGCTTAATCGAGCACTGGTTCTAACTATCGCCAGATCCATGCACGTGACAGGAGCCGAGTCTTCCGGTAACTGGTGTGATGGCATTCTTGGCGTACTTATTGCCAACACTCCGCACAGCTGGGCGTCACATACGCTCGCTTGCTTCCCTCAGCCGCTTCAGCAGTTCTATAGCGAGAATCCGACTGACCGACCCGTCAAGACCAAGCAGGCACTACGCAACCACGTGGAGGAGGAGTATCGACGGTGGAAGTCGATGACTTCCGAGCACGAATTGTTGGCACACTTTACTGACCCGACCTTATCAAATGTGTTTATATGTATTCTATGGAAGGTGCTCTTGGACACCGGCAGGCTTAGTCCGCTCTGTCACAAGATACTCGAGCAACTCGGAGCGCGTGCTCTGTCGAGTCACGTGCGCTTCTTTGCGGATTTTCTCGTCTATGAGTTCTCGACATCAGGAGGAGGCAAACACGTGAACAAGTGTATTCAGCACTTGAATGACTTGATTTGGAAGTACAACGTGGTAACACTCGATCGCCTGGTTCTTTGCCTGGCACTTCGTAGTCATGAGGGGAATGAGGCCCAAGTTTGCTTCTTCATCATTCAGTTGCTGCTGCTCAAACCGCAGGAATTTCGGAATCGAGTCAACGCCTTTGTGCGGGAGAACTCCCCGCAGCATTGGACCCAGACGGACTGGCACCAGCGACACATGGCGTACCATACGAACTACCCGGAACGGTTCTATTTCGAGGGACTTCTAGAGGTAGCTGGTAACGCCGTACCTCCCGTGCAGTATTTACCGATATACTTCGGTAACGTATGCCTCAGGTTCTTACCGGTTTTTGATATCGTGATTCACCGGTTTCTTGAGCTTCCGCCAGTCTTCAAGTCTCTAGAGAGCCTTCTCGACCATCTCGGCTCACTCTACAAGTTCCACGATCGTCCCGTGACTTATTTGTACAACACGCTTCATTATTATGATGCTTGCCTGCACGAGAAAGCGTCGCTCAAGAAAAAGCTTGTCGGTGCTATTATTGGAGCGCAAAGAGACATACGCCCCCAGGGATGGTGTCTCTCCAAGGGTTATGTGGACTTTCTCTCATGGAGTGACGAAAGCCAATGGACACCAGACCTTGCCTACTATTGTAATTTGATTGGCCGCGTCGTTGACACCATCGCTGAACGGACGCCGCCTCCCTTCCCGACATGCGACTGGCGCTTCAATGAATTTCCAAACCCCGCCGCGCATGCACTACACGTGACTTGCGTTGAGCTGATGGCGCTTCCGGTTAGCGGCAAGCAGGTCGGCTTCCGGTTGTTTGACGTCATCTATCGCGGTAGCACTGTCGTACCGCGCGAATCCCGGATGAGGGATCAGTTAATGGCCTGGATAAACGCAGTGGGACTTGTTATGACGTCACTTCCGGAGGCGTACTGGACGGTGATTTACGACAAGATATGCGAGGTGTTGCAAAATGACCTTCAGTCCAAGGATGTATCTCCCTCGCCCATAATCCACGAAGAGACGTTTCGCCCCGCCATGTTCCCCTACTCTTTTTTCGACTTTGAGACCAACGTTGCCATGCACTCCGAGACTCACGCGGACTACGTCATGGCACTCACGCATGCGCTATGGCACCACACTAGCATTGGTCAGCTGACACTTGTACCCCAATTGTTGCGGTCCCGTATCTCGCCGCTGGTCGGTAACGAGGCTCAGTTTCTTTATCTGTGTCGGCTTGTTGGACCGTTCCTTCAGCGATTCCAGCAGGAGAGGACACGCTGCCTTCAGGAGGTCGTTATTGAGCTCTACCATTTGCTTGAGAAGATCGACAAGGAAGCGCAGCATCTTTACCACATCGACATCATTTGCGACTTTATGTACCACATCAAGTACATGTTTGTTGGAGATCTCATCAGAGAACAAGTCCAGAAAGTCATCCCTATGTTACGCCACTCATTACAAGTCAGGCTTAGGTTTATGACACAGACTTCGGTCAAACGAGAAGAGACCACGTGA

Transcript

rna-XM_048727198.1

AGTACCAGTCTTCAGACAATCTTCCCGTCCAATATGGAAGCCATTGCTTGACAATTActtattttaaaagaaaagaaataagtACAGAGACCATTCACTAAAAAGACATCACGTATTAACTCAAGCGACCCTATGGACCACAAAGTGCTATTACGGGCGATTCTCGATAGCGCGTTGaaaattgaACCAATCGAAACCGCTTTTTCAGGCTGCTTGGTACAGAAAGAAAGTGACAATGTTGATGTCGAGGCATTATTTCTCAAGCTGTTCAAGCCATTTTGGGTGAAGCTTCCAGCAGAGTCCCGCGAGACTATCCTAACAGAGTTTGTGGCCTACATTCATCAGCAGAATAATCTCAGAAGAATAGAGTTATGTTTTGGTTTGCTTGCAAGTCTTGTTGCAAATAGTGTAGTATTACCAAGGTCTGTGTGTGAGGCTGTTTTGAAGTCAGAGCATCTGAAATTTGATGATGAAGTTAAATGGTGCAAATCATTTCAACTTTTAAGGGTAATTTCAGGCGGTACTGACTACAAGGGCTGCCGAGATGTACTTAGTCttgtttttcaaaaatttAATTTGATTCCAAAAGAGCCAGACCCAGCCTATACAGACCGCATAGAATGTGCAGTAAAGGTTGTACAGTATATACTTGACAGGAAAGCCTGTCTTCTTCCAGCCTACTTTGTAATTAATGAGATCTTTAAAGATTTTCCTGAAGGGAAGGCAACCCCACATTGGTCTCTGAGCAAGCTTCTGTCCGATTATGTAGACAGCTTCCGACCTCTTGCTCACATGGTTACCGTCACGGGCCGTCCACTGCTCCTGCCAATCATTGGGCATCCCAGCTCATCTATTGGTGTATGGAAACTGGATCCGGCAACACTCAGCTTCCCCATGAAGGGCTTGCTCCCCTATAACAAGAGTTTATTCAAGCCTCAGAAGAACCTTCTCCAGTACGTTATTGGTCAGCCTTATTCTCGTGAGATCATTTGTTCAATGCTGGGGCTGAATAAACAGCAAAAACAGCGCTGTTTGGCGCTCGAGGAACTTCTCGTGGACCTTATCGTCATCGCCATGGAGAAATCTGAACACGACCAGTCGGGACTTGATGACACTGCCTGTCagttgctatggcaacaccTATCCAGCCATCTCATCTTCTTCGTGCTGTTCCAGTTTGCGAGTTTTCCACACATGGTGCTAGCGCTTTATGACAAGTTGCAAGGCCGTAACTTGCGTCAGGGCAGAGATCATCTTATGTGGGTTCTCCTACAGTTTATATCTGGAAGCATCCAGAAAAATCCGATTAGTGACTTCAAGCCAGTAATAAAACTCTTTGAGTTACTGTATCCTGGGAACGAGCCTCTACCAGAGCCAGATATAAATCATGCAGATTCCATCCACTCACTGGCAATGGCCTGTATTTGGATACATTTGTCGAAAAAGGCTGAAGGGGAAAACATCAAGTTCCCGTTTTCAACTTGTCACACCCTCCGCAAACAGCTAGAGTATATTGAAAAGTGCTCTGCAAGCAAACCAACCGCGTTATCATCTTCAAATTTCACGATTCCTTTACTGTGCAATGCCTATAGCACGATACCGAACAAGTTTACTGTGGCTATGTCAGTCCTGGTCGAGATGTGTTTTGGAAATGGTAAACCCAGTACCCCCCTTCCTGGCCCGTCCAACACTGTCGCCGCAAGCCCGACCGTACCATGTCCTCTTAGCCTGCTGGATTCGCTTTCAGTGCACGCTAAGATGAGTCTTATTCACAGCATCGTTGCGCGTATTATCAAGATGGCCACATCTGGGACCTCTCTGGCATTAGCGCCAGCTCTCGTGGAGACGTACAGTCGTCTTCTGGTTTACATGGAGATAGAATCACTCGGAATACGGGGATTCATCAGTCATCTTCTGCCAAATGTGTTCAAGAGTCAAGCATGGGGCATCCTGCACACCCTGCTAGAAATGGTCAGCTATAGACTACACCATATTCCGCCAAACTACAGGGTCACTCTGCTATCTCACTTGCACACCATAGGGGCCGTCCAACAAACCAATCATAACCAGCTAAACTTGTGCGTTGAGAGTACCGCTCTGCGCCTGATAACAGGGCTTGGTAGCTCTGAGGTTCAACCGCAGCTTTCCAAGTTCATAGCTGAACCCAGACAGATCTTGTCTGCGGAATCCGAAGAGCTTAATCGAGCACTGGTTCTAACTATCGCCAGATCCATGCACGTGACAGGAGCCGAGTCTTCCGGTAACTGGTGTGATGGCATTCTTGGCGTACTTATTGCCAACACTCCGCACAGCTGGGCGTCACATACGCTCGCTTGCTTCCCTCAGCCGCTTCAGCAGTTCTATAGCGAGAATCCGACTGACCGACCCGTCAAGACCAAGCAGGCACTACGCAACCACGTGGAGGAGGAGTATCGACGGTGGAAGTCGATGACTTCCGAGCACGAATTGTTGGCACACTTTACTGACCCGACCTTATCAAATGTGTTTATATGTATTCTATGGAAGGTGCTCTTGGACACCGGCAGGCTTAGTCCGCTCTGTCACAAGATACTCGAGCAACTCGGAGCGCGTGCTCTGTCGAGTCACGTGCGCTTCTTTGCGGATTTTCTCGTCTATGAGTTCTCGACATCAGGAGGAGGCAAACACGTGAACAAGTGTATTCAGCACTTGAATGACTTGATTTGGAAGTACAACGTGGTAACACTCGATCGCCTGGTTCTTTGCCTGGCACTTCGTAGTCATGAGGGGAATGAGGCCCAAGTTTGCTTCTTCATCATTCAGTTGCTGCTGCTCAAACCGCAGGAATTTCGGAATCGAGTCAACGCCTTTGTGCGGGAGAACTCCCCGCAGCATTGGACCCAGACGGACTGGCACCAGCGACACATGGCGTACCATACGAACTACCCGGAACGGTTCTATTTCGAGGGACTTCTAGAGGTAGCTGGTAACGCCGTACCTCCCGTGCAGTATTTACCGATATACTTCGGTAACGTATGCCTCAGGTTCTTACCGGTTTTTGATATCGTGATTCACCGGTTTCTTGAGCTTCCGCCAGTCTTCAAGTCTCTAGAGAGCCTTCTCGACCATCTCGGCTCACTCTACAAGTTCCACGATCGTCCCGTGACTTATTTGTACAACACGCTTCATTATTATGATGCTTGCCTGCACGAGAAAGCGTCGCTCAAGAAAAAGCTTGTCGGTGCTATTATTGGAGCGCAAAGAGACATACGCCCCCAGGGATGGTGTCTCTCCAAGGGTTATGTGGACTTTCTCTCATGGAGTGACGAAAGCCAATGGACACCAGACCTTGCCTACTATTGTAATTTGATTGGCCGCGTCGTTGACACCATCGCTGAACGGACGCCGCCTCCCTTCCCGACATGCGACTGGCGCTTCAATGAATTTCCAAACCCCGCCGCGCATGCACTACACGTGACTTGCGTTGAGCTGATGGCGCTTCCGGTTAGCGGCAAGCAGGTCGGCTTCCGGTTGTTTGACGTCATCTATCGCGGTAGCACTGTCGTACCGCGCGAATCCCGGATGAGGGATCAGTTAATGGCCTGGATAAACGCAGTGGGACTTgttatgacgtcacttccgGAGGCGTACTGGACGGTGATTTACGACAAGATATGCGAGGTGTTGCAAAATGACCTTCAGTCCAAGGATGTATCTCCCTCGCCCATAATCCACGAAGAGACGTTTCGCCCCGCCATGTTCCCCTACTCTTTTTTCGACTTTGAGACCAACGTTGCCATGCACTCCGAGACTCACGCGGACTACGTCATGGCACTCACGCATGCGCTATGGCACCACACTAGCATTGGTCAGCTGACACTTGTACCCCAATTGTTGCGGTCCCGTATCTCGCCGCTGGTCGGTAACGAGGCTCAGTTTCTTTATCTGTGTCGGCTTGTTGGACCGTTCCTTCAGCGATTCCAGCAGGAGAGGACACGCTGCCTTCAGGAGGTCGTTATTGAGCTCTACCATTTGCTTGAGAAGATCGACAAGGAAGCGCAGCATCTTTACCACATCGACATCATTTGCGACTTTATGTACCACATCAAGTACATGTTTGTTGGAGATCTCATCAGAGAACAAGTCCAGAAAGTCATCCCTATGTTACGCCACTCATTACAAGTCAGGCTTAGGTTTATGACACAGACTTCGGTCAAACGAGAAGAGACCACGTGAAACGGTAAAGATAACACGTGACCAGACGTAAATCACCCCAAGTTTCGCCTACTCGCTACAACTCCGGTCAAACTAGAAGAGACCAAGTGATAAGCCCACGTGATAGAATAAATGTTCACGTGATAGGGTCTGACAGCAGGTGAACAGCAGTCGCATCAATAATATCCCTCGCCTAAAAGTGTGAAGAACATTTGAATCACAAGGCGTTTTCCAGCCGGCGGAAGGCTGTACAAGACAGAAGCTATGATAACTCAGTAATGGAACATATCTTCGATCACATAGTGACCTTATGTATGATATACACCTTGTAGATAAAGTATCAAAATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6P423	Mediator of RNA polymerase II transcription subunit 23 OS=Xenopus laevis OX=8355 GN=med23 PE=2 SV=1
Q9ULK4	Mediator of RNA polymerase II transcription subunit 23 OS=Homo sapiens OX=9606 GN=MED23 PE=1 SV=2
Q5EB59	Mediator of RNA polymerase II transcription subunit 23 OS=Rattus norvegicus OX=10116 GN=Med23 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003031 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11573 all species →	Med23	Mediator complex subunit 23	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021629 all species →	Family	Mediator complex, subunit Med23	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12691 all species →	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005667 all species →	Cellular Component	transcription regulator complex	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0010628 all species →	Biological Process	positive regulation of gene expression	Interproscan
GO:0016592 all species →	Cellular Component	mediator complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15166	MED23; mediator of RNA polymerase II transcription subunit 23	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_048583155.1 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

40TPM > 0

16Conditions

19.4Max TPM

5.7Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	8.05	9.98
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	6.11	8.27
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	4.39	4.85
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	3.90	4.04
whole 6 week old aboral regenerate · regenerate uncut	3	3	5.40	5.97
whole 6 week old aboral regenerate · regenerate 4hpa	3	1	1.27	3.80
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	5.04	8.59
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	8.06	9.39
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	4.85	8.54
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	6.86	7.79
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	6.71	7.05
whole 6 week old aboral regenerate · regenerate 72hpa	3	3	11.63	19.42
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	7.19	8.78
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	5.07	9.46
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	5.10	7.96
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	2.23	6.68

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	9.98
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	8.62
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	5.55
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	8.27
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	5.09
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	4.97
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	4.85
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	4.27
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	4.06
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	4.04
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	3.84
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	3.82
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	5.97
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	5.42
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	4.83
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	3.80
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	8.59
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	6.54
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	9.39
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	8.12
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	6.68
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	8.54
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	6.02
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	7.79
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	6.54
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	6.25
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	7.05
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	7.04
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	6.05
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	19.42
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	9.01
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	6.47
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	8.78
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	7.16
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	5.62
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	9.46
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	5.74
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	7.96
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	7.33
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	6.68
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.