Gene detail

Detailed information of XP_048583183.1 in Nematostella vectensis

Genomic Location: NC_064037.1:3784518...3801119
NR annotation: XP_048583183.1, uncharacterized protein LOC5513112 isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5513112

ATGGATATCAAGGTGATGCTGCTGTGGAAGATTCTAGCAATCGCGGTATTTTTCACCGTGGTCGATTCCGGAAGACACCGTAACTTAAGGAGGAACATTCGTAAAGATGTAATCGCTTCTAACGGAGAGGCAGTAACATTTTTTGTCATGGGTAACCCATCTAACGAAGATACGGAACAAAACGTTCCAACTAAGCGTGTGGATGAAAGCAATATCAAAGCCTCAAACAAGGATACAATAAGTTCAATAAAGGATAGATCTGCGCCAACGGGTGTAGCGAAGAAGAAGACTGTCCCAGTTCATCATAAAAAGACGAAGAAGAAATCAAAAAAATCATCTAGAGGTAACATTGGCAGCATTAATGATATCCAGTCTGCTTATCGACACGGCATCGATGTGGATGCTGAGAATAGCTTGGAACGAGTCAAGATGATAGACGATGGTGCGCTAACCGATTACTTCCATGCCATCAATGGCGAGGATAACAAGCAGAATGCTGAATCCGATGATCAAGGTACCTCCCCTGAGAACACGGAATCAAACGAAGTATCTCAGAGTACGGACCTACCTCAAGCAAAGATGGGAGATACTCCGGGGATAGAGGTTTACACGGATAATCCGGAGGACGAGCAAGACGACTTTTACGCTGCTATTAACAGAGGGAAGAAGACTCCACCATTAATGAAGGAGATGAGACCCACAAAGTCACACTTTGCGGATGTTCCGGAGCAGCACTGGAAGCCGCGACATGTGTACAGTGATCGTCTTAGCTATAATTCAAACGACGAGATGACCCCTAGTGAAGTGACCCACGGGAACGCAGGGTTTGCCAGCGCGTTGACTGATACGGAAGATCACAATGAAGTCAGCAAGGCGAACAATTTGGACACAAAAGAACATGGCGTCCAAGATGCTGGACGTCATAATGAGGCCGGGAGTGACAATAAACCAAAAGAAGATAGCCCTAAAGCTGGGGATAGTGCTGGGGCTAATATGGCTAGCGTGAATACAGCTAAGGTGGAAAAAAGTAAGGCAACAGATACTGCTAAACAGGACGGCTCTAAAAGCACAAATACAAGCACTAATTCTTCCAAGCAAAATTCAAACGTGACTACCAGCGACCAGAAATCAGCTCCAAAAGAACAGACCAAGGGCATACCTGCAAGCCAGGATCAAAGTAAGGATGGTGAATTTGGAATGGGTAGCCCATTCTTGAGCAATCCATTCGTCAATCCCTTCTCACTGTTCGAGTTCAATAAGCCTCATAAGCAACAAGACAGCAAGACAACTAAGTCTCCGAATATACAGGTTCCTATGAAGGGGATCAAGGGCACACAAATTGTCGGAGGGAAGATCACTGGGGGAAGAATCGTTGGTGGGTTCATTCAAGGGGGCAATATCGTATCCGGCGACATCGAGGGTGGGGTCATCAAAGGAGGGCAGGTCGAAGGAGGCAAGTTTCTGAATGGGACAATGGAAGGCGGCTTGTTGCACGATGGCGTGATCGATGGAGGCCGTTTTGTAAATGGCACATTTGAGGGCGGATACATGAAAGATGGCATTGTTTCAGGCGGAAAGATCAAGGGAGGAAGAATAGAAGGGGGCGAGATCGAAGGTGGTCTTCTTATAGGAGGGCGTTTCCGAGGTGGAAGGCTGCAAGGTGGGGTGATGAGGGGAGGTGAGGTAGTTGGTGGTATGATCAAGGGTGGAAACATAGAGGGAGGGATTATGACGGGTGGAAGCGTCGAGGGAGGAAGCCTGAAGGAAGGAAAGATGTCCGGAGGAACCCTCAAAGCGGGAGCGATGTTTGGTGGCGAAATGAAGAACGGAAGCATCGAAGGTGGTATCCTGAAATCTGGAATTATTAGTGGAGGTATCCTGAAAGGTGGGACGATAGAAGGAGGTGAGTTAAGGGGAGGAGTGGTTCTTGCTGGTAAGATTAAAGGAGGTATAGTAGAAGGTGGAGTGATTGAAGGTGGAGAGATAGGAGAGGGAGTGATTGTCAAAAGTGGACACATCAATGGGACGATTGTGGCTGTACACAGCGATAGGGCTGGAGCACCTCCTCCTCTGATCGTCAAAGAGCCAAAGCATGTAGATGACTCGGTGCAAGCTGGAAAGAAAGCCTCTTCGAAGACAAGCAATGGCGGCAAGCTGAAGTCGTCTCAGACGGAATCGTTTACATCAGTACGCAATGGTAAGCACCATGTCGTGTTTGATGGTATCAGCTTTGATGTCCCTGAAGACGGTTTTAGTGACTTGATCAGTAGAATGAATGGCAACCCGAATGACCTTGAGAATCTCTTGAACACGGACAACGAGACAATTGGACATTCGACAATAGAACAACAAACGCAGTTCACTGATAAACCTACTGATAAACCCACAGAACAAACACCAACGAGCAAAGTAACAAGCGCAGCTATGGAGACAAAGTCTAGCGGTGCGCATGACGACTCGGGCATTAAGCCTGAGGATATTATTAATAAACTTAGCCCGACTGAGGGGCAGTCAGCATCTCAGGCGCCTTTTGTGCATGTGCATGCTAAGGACAGCGCTGTCAAGCCTACATACCACTGGTCTTTGAGCAGTCTTCTAGATGAGCGAATCCCCGGTAGCCCCGGGTCTGCCATGATCACGCACGGACACGTGCAACCCACGCGCGGAGGACTCGCGTTTAATGGTGAAGACGCGTGGCTGGGTGGAGGGGATTATGCAGGGGGCTGCATCAGCGCTCCTGACACGTGCGCTGATGGTTTTTCATTCGAGATGACGCTCAAAATGGACAAGGACGCCATCAATACCAACGACATGAACTACATAGTGGATTCCGGTGCTTCCACGTTCAATTCCAAGGGTTTCTCTCTATACACGCTCCACGGCAAGCTGCGTGCGGACATCGCGATTCCCAATGACGCCATCTGCCTGGAGACGCCCATGGAACCAGACCGCTGGCACGATGTTCTCGTCACATGGAAAAAAGACCAGGGTCTGCGCATGTACATGAACTGTGAGCTGAAGGCAGAGACTAAGAGCAATGACCATTGCCTGGGCTGTCGATCAACAGGATGTCACGTGTCCGACTATAATACCAAGCTCATGATTGGTCGGCCGAACTACAGTCCTCACTTCCACTGCACCAAATTTGAGAGCGGAGACATCTCGTTTTGGGAGAGGTACCTTTCACCTGCTGACGTCAGCAACATCTGCGCCAAGGACACGGTGATGCTGAACGATGCAATTCCATCTAAAGAGCCGATCAAGACAATAAACCCAGAGGCCAAACCGGTCATACTAAAGGGTACCACTCAAGAGGGCGTGGTTAGCACCCCTCTTATCGCCCCCCTTGACACCCAAGCACAACCACAACCCGTACAACTACAGCAAGTCGTGCCCTTGCCGCAAGGGAAGTACCTCCCACAAACACCAAAGATCTACGGTAAGGCTCCTTTTATCGGGCCACAGACCATTACGCCAAATGCAAACGGAGAATACGAAGTGAAATTTCCCAGTATGATGCAAATAGGAAAGACCTACGAGTTCGATCAGGTCATACCAGCAATGCGAGCGCCTCCCCCGCAACCTTACAACAGCTACCAGCAACAACAGCCCATGCAGAACCCCATGATGCAAGGCGGGCTATATTCGTCACCAGCCTCCTACGCGAGCGGAGTTGGGCGAGATAGCGTACAAGCCGCGGGCACGGTGCCAAAATACTTCACACAGTGGAGTCGTTGGAGTGCATGCTCTAAGTCCTGCGGTTATGGCGTGCGGGCTCGAAAACGCACATGTCTGAATCCTCGCATCCTATTGGCTGGAAGAGTGTGCAGTGGGCCGTCAATACAACATGGCTTCTGCTTCCAGGCGCCATGTCCGGGTTCAACTCGTAGTCAAGCGCGCAAGTCTCTCGTGCGACAGATCTTACGCAGTATGGTGAACAACTTTGCTCTGCAAATGGCGACGCACCCAACAATCGACAAAACATTTCTAGGTACAGCATCGCATGCGAATGTCATAAAATCCAAAACCGCTGAGGAGCCGGGGACTACCCGGCAACTGCATGAGTCAGATCATGGTGGATATGGTCTGTGGTCGCTATGGGGATCATGTAGCAAGTTATGTGGGACGGGAACACAGTTGCGCACGCGCATTTGTCATAGCCGGAAGTCATGTGTTGGGCCATCGACGCAAGTGAGACACTGTAACCCGCAACCATGTCCAAGTTCAACTCGTAGTCAAGCGCGCAAGTCTCTCGTGCGACAGATCTTACGCAGTATGGTGAACAACTTTGCTCTGCAAATGGCGACGCACCCAACAATCGACAAAACATTTCTAGGTACAGCATCGCATGCGAATGTCATAAAATCCAAAACCGCTGAGGAGCCGGGGACTACCCGGCAACTGCATGAGTCAGATCATGGTGGATATGGTCTGTGGTCGCTATGGGGATCATGTAGCAAGTTATGTGGGACGGGAACACAGTTGCGCACGCGCATTTGTCATAGCCGGAAGTCATGTGTTGGGCCATCGACGCAAGTGAGACACTGTAACCCGCAACCATGTCCAAGTACGTGTTACGTGTTACGTGCAACCATGTCCAAGTACGTGTTACGTGTTACGTGTTACGTGCAACCATGTCCAGTTGACGGTGGATTTAATGACTGGTCGGAGTTCTCTCTCTGCACGAAGACGTGTGGTGCTAGGGCAATGAGGTTCAGATTGAGATCATGTGATAACCCTCAACCAGCTTTTGGCGGCAAACCTTGCGCAGGACCGACCAAGCAGACTATTCCATGTGGGAAACTGCCACCTTGCCCACTAAATGGTGGCTATAGCCCGTGGGGAGCCTGGTCCGGCTGTGACGCAGACTGTGGGGGAGGAGTACGGGAGAGAACGCGCTTCTGTACGAATCCCGTGCCCGGGTGGGGTGGAAGACACTGTGAAGCGTTAGGTCCAAGCAAAGTTTCGGAGCTGTGTAACCTCGCTCCGTGCACCGACATCAAAAACAACGAAAAAACTCGTGTGACATCACCAAACAAGACTGGGGCGACCAAACAACTTGTTAGTTTTATCAGCCAGCTATAG

Transcript

rna-XM_048727226.1

TTCGTTGCTATCTGAAGTGTGCGCATGCGCGTAATAACTCTTCCCTCTCGTACGGCCCTGGCATCCTTTGCCCTGGATTTACGACAAAAATTGTATCTTGAAGGACGTTAAAACCTGAATTTTTGATGGAGTTTGAAGAAGATCGACAACGAGGCAGCCTAGCAAAGACTTTGTACTGATGACTACGAATTGATTGAAACCCGAGACAATTATATCGACGACAAACGTTTGATCGCATCGTCACAGGAAAGATGGATATCAAGGTGATGCTGCTGTGGAAGATTCTAGCAATCGCGGTATTTTTCACCGTGGTCGATTCCGGAAGACACCGTAACTTAAGGAGGAACATTCGTAAAGATGTAATCGCTTCTAACGGAGAGGCAGTAACATTTTTTGTCATGGGTAACCCATCTAACGAAGATACGGAACAAAACGTTCCAACTAAGCGTGTGGATGAAAGCAATATCAAAGCCTCAAACAAGGATACAATAAGTTCAATAAAGGATAGATCTGCGCCAACGGGTGTAGCGAAGAAGAAGACTGTCCCAGTTCATCATAAAAAGACGAAGAAGAAATCAAAAAAATCATCTAGAGGTAACATTGGCAGCATTAATGATATCCAGTCTGCTTATCGACACGGCATCGATGTGGATGCTGAGAATAGCTTGGAACGAGTCAAGATGATAGACGATGGTGCGCTAACCGATTACTTCCATGCCATCAATGGCGAGGATAACAAGCAGAATGCTGAATCCGATGATCAAGGTACCTCCCCTGAGAACACGGAATCAAACGAAGTATCTCAGAGTACGGACCTACCTCAAGCAAAGATGGGAGATACTCCGGGGATAGAGGTTTACACGGATAATCCGGAGGACGAGCAAGACGACTTTTACGCTGCTATTAACAGAGGGAAGAAGACTCCACCATTAATGAAGGAGATGAGACCCACAAAGTCACACTTTGCGGATGTTCCGGAGCAGCACTGGAAGCCGCGACATGTGTACAGTGATCGTCTTAGCTATAATTCAAACGACGAGATGACCCCTAGTGAAGTGACCCACGGGAACGCAGGGTTTGCCAGCGCGTTGACTGATACGGAAGATCACAATGAAGTCAGCAAGGCGAACAATTTGGACACAAAAGAACATGGCGTCCAAGATGCTGGACGTCATAATGAGGCCGGGAGTGACAATAAACCAAAAGAAGATAGCCCTAAAGCTGGGGATAGTGCTGGGGCTAATATGGCTAGCGTGAATACAGCTAAGGTGGAAAAAAGTAAGGCAACAGATACTGCTAAACAGGACGGCTCTAAAAGCACAAATACAAGCACTAATTCTTCCAAGCAAAATTCAAACGTGACTACCAGCGACCAGAAATCAGCTCCAAAAGAACAGACCAAGGGCATACCTGCAAGCCAGGATCAAAGTAAGGATGGTGAATTTGGAATGGGTAGCCCATTCTTGAGCAATCCATTCGTCAATCCCTTCTCACTGTTCGAGTTCAATAAGCCTCATAAGCAACAAGACAGCAAGACAACTAAGTCTCCGAATATACAGGTTCCTATGAAGGGGATCAAGGGCACACAAATTGTCGGAGGGAAGATCACTGGGGGAAGAATCGTTGGTGGGTTCATTCAAGGGGGCAATATCGTATCCGGCGACATCGAGGGTGGGGTCATCAAAGGAGGGCAGGTCGAAGGAGGCAAGTTTCTGAATGGGACAATGGAAGGCGGCTTGTTGCACGATGGCGTGATCGATGGAGGCCGTTTTGTAAATGGCACATTTGAGGGCGGATACATGAAAGATGGCATTGTTTCAGGCGGAAAGATCAAGGGAGGAAGAATAGAAGGGGGCGAGATCGAAGGTGGTCTTCTTATAGGAGGGCGTTTCCGAGGTGGAAGGCTGCAAGGTGGGGTGATGAGGGGAGGTGAGGTAGTTGGTGGTATGATCAAGGGTGGAAACATAGAGGGAGGGATTATGACGGGTGGAAGCGTCGAGGGAGGAAGCCTGAAGGAAGGAAAGATGTCCGGAGGAACCCTCAAAGCGGGAGCGATGTTTGGTGGCGAAATGAAGAACGGAAGCATCGAAGGTGGTATCCTGAAATCTGGAATTATTAGTGGAGGTATCCTGAAAGGTGGGACGATAGAAGGAGGTGAGTTAAGGGGAGGAGTGGTTCTTGCTGGTAAGATTAAAGGAGGTATAGTAGAAGGTGGAGTGATTGAAGGTGGAGAGATAGGAGAGGGAGTGATTGTCAAAAGTGGACACATCAATGGGACGATTGTGGCTGTACACAGCGATAGGGCTGGAGCACCTCCTCCTCTGATCGTCAAAGAGCCAAAGCATGTAGATGACTCGGTGCAAGCTGGAAAGAAAGCCTCTTCGAAGACAAGCAATGGCGGCAAGCTGAAGTCGTCTCAGACGGAATCGTTTACATCAGTACGCAATGGTAAGCACCATGTCGTGTTTGATGGTATCAGCTTTGATGTCCCTGAAGACGGTTTTAGTGACTTGATCAGTAGAATGAATGGCAACCCGAATGACCTTGAGAATCTCTTGAACACGGACAACGAGACAATTGGACATTCGACAATAGAACAACAAACGCAGTTCACTGATAAACCTACTGATAAACCCACAGAACAAACACCAACGAGCAAAGTAACAAGCGCAGCTATGGAGACAAAGTCTAGCGGTGCGCATGACGACTCGGGCATTAAGCCTGAGGATATTATTAATAAACTTAGCCCGACTGAGGGGCAGTCAGCATCTCAGGCGCCTTTTGTGCATGTGCATGCTAAGGACAGCGCTGTCAAGCCTACATACCACTGGTCTTTGAGCAGTCTTCTAGATGAGCGAATCCCCGGTAGCCCCGGGTCTGCCATGATCACGCACGGACACGTGCAACCCACGCGCGGAGGACTCGCGTTTAATGGTGAAGACGCGTGGCTGGGTGGAGGGGATTATGCAGGGGGCTGCATCAGCGCTCCTGACACGTGCGCTGATGGTTTTTCATTCGAGATGACGCTCAAAATGGACAAGGACGCCATCAATACCAACGACATGAACTACATAGTGGATTCCGGTGCTTCCACGTTCAATTCCAAGGGTTTCTCTCTATACACGCTCCACGGCAAGCTGCGTGCGGACATCGCGATTCCCAATGACGCCATCTGCCTGGAGACGCCCATGGAACCAGACCGCTGGCACGATGTTCTCGTCACATGGAAAAAAGACCAGGGTCTGCGCATGTACATGAACTGTGAGCTGAAGGCAGAGACTAAGAGCAAtgaccattgcctgggctgtCGATCAACAGGATGTCACGTGTCCGACTATAATACCAAGCTCATGATTGGTCGGCCGAACTACAGTCCTCACTTCCACTGCACCAAATTTGAGAGCGGAGACATCTCGTTTTGGGAGAGGTACCTTTCACCTGCTGACGTCAGCAACATCTGCGCCAAGGACACGGTGATGCTGAACGATGCAATTCCATCTAAAGAGCCGATCAAGACAATAAACCCAGAGGCCAAACCGGTCATACTAAAGGGTACCACTCAAGAGGGCGTGGTTAGCACCCCTCTTATCGCCCCCCTTGACACCCAAGCACAACCACAACCCGTACAACTACAGCAAGTCGTGCCCTTGCCGCAAGGGAAGTACCTCCCACAAACACCAAAGATCTACGGTAAGGCTCCTTTTATCGGGCCACAGACCATTACGCCAAATGCAAACGGAGAATACGAAGTGAAATTTCCCAGTATGATGCAAATAGGAAAGACCTACGAGTTCGATCAGGTCATACCAGCAATGCGAGCGCCTCCCCCGCAACCTTACAACAGCTACCAGCAACAACAGCCCATGCAGAACCCCATGATGCAAGGCGGGCTATATTCGTCACCAGCCTCCTACGCGAGCGGAGTTGGGCGAGATAGCGTACAAGCCGCGGGCACGGTGCCAAAATACTTCACACAGTGGAGTCGTTGGAGTGCATGCTCTAAGTCCTGCGGTTATGGCGTGCGGGCTCGAAAACGCACATGTCTGAATCCTCGCATCCTATTGGCTGGAAGAGTGTGCAGTGGGCCGTCAATACAACATGGCTTCTGCTTCCAGGCGCCATGTCCGGGTTCAACTCGTAGTCAAGCGCGCAAGTCTCTCGTGCGACAGATCTTACGCAGTATGGTGAACAACTTTGCTCTGCAAATGGCGACGCACCCAACAATCGACAAAACATTTCTAGGTACAGCATCGCATGCGAATGTCATAAAATCCAAAACCGCTGAGGAGCCGGGGACTACCCGGCAACTGCATGAGTCAGATCATGGTGGATATGGTCTGTGGTCGCTATGGGGATCATGTAGCAAGTTATGTGGGACGGGAACACAGTTGCGCACGCGCATTTGTCATAGCCGGAAGTCATGTGTTGGGCCATCGACGCAAGTGAGACACTGTAACCCGCAACCATGTCCAAGTTCAACTCGTAGTCAAGCGCGCAAGTCTCTCGTGCGACAGATCTTACGCAGTATGGTGAACAACTTTGCTCTGCAAATGGCGACGCACCCAACAATCGACAAAACATTTCTAGGTACAGCATCGCATGCGAATGTCATAAAATCCAAAACCGCTGAGGAGCCGGGGACTACCCGGCAACTGCATGAGTCAGATCATGGTGGATATGGTCTGTGGTCGCTATGGGGATCATGTAGCAAGTTATGTGGGACGGGAACACAGTTGCGCACGCGCATTTGTCATAGCCGGAAGTCATGTGTTGGGCCATCGACGCAAGTGAGACACTGTAACCCGCAACCATGTCCAAGTACGTGTTACGTGTTACGTGCAACCATGTCCAAGTACGTGTTACGTGTTACGTGTTACGTGCAACCATGTCCAGTTGACGGTGGATTTAATGACTGGTCGGAGTTCTCTCTCTGCACGAAGACGTGTGGTGCTAGGGCAATGAGGTTCAGATTGAGATCATGTGATAACCCTCAACcagcttttggcggcaaaccTTGCGCAGGACCGACCAAGCAGACTATTCCATGTGGGAAACTGCCACCTTGCCCACTAAATGGTGGCTATAGCCCGTGGGGAGCCTGGTCCGGCTGTGACGCAGACTGTGGGGGAGGAGTACGGGAGAGAACGCGCTTCTGTACGAATCCCGTGCCCGGGTGGGGTGGAAGACACTGTGAAGCGTTAGGTCCAAGCAAAGTTTCGGAGCTGTGTAACCTCGCTCCGTGCACCGACATCAAAAACAACGAAAAAACTCGTGTGACATCACCAAACAAGACTGGGGCGACCAAACAACTTGTTAGTTTTATCAGCCAGCTATAGCGTACACGAGGCGCAAATGGGGTGTGGACATTGTCCCGTCTGTTGGCGAAGAGCGACCCTACACCAGTAAGAAAAGGCGTCCTGGTAGACCAAGACATCAAGCCACCACATCTTCAAAACAGCCAATTTCTTGTTTAACAAGCAGTTTAAGTGATTTTCTGGGTAAAACATTTCGCGTCAACTCCACACGTTTCCTCAGTCCTGTCACCAGTCCGAGAGTTAGGGCTGACCGGAAATCAGAGTACTAACCGGAAGTGCCTTCCCTCTTGGACATCAACACGTGCAGCGTGACAGCATGAAGGCCTTGTAATGAATTCGTCCGGTTATTTGTACTGGCTGTGGGTGCCGGTTCCGGACGCCACGCATATCTGAGGTCCTTAAAGGCGCTGGACTCAACACTCAGCTTACCAATTAAAATGATTGCTCTCTTGTCAAGACAACCAGAGATATGTACTGGGGAGATTTTTGAGGTTTAGAAGTTGTTTTTTCCTGGTTTCTcctttaatttaaaaaatcgcAAGGGATGTTGATAGTGAGGCTATGTAAGggaatttatatttatttatatataattttgaATTAGGAGGGGGGATATTTATCAAAGAACAGTTGTAGCACGGGCAACTTGCTGGAGTATTTACCGGAAAAGCCCTCGAGAATTGCAATTATTTAATACAACCATCAGTCGAACATTTTTTTACACGTGAATAAAACAAATCTAACAGTTTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B3EWZ3	Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
Q96RW7	Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
B3EWY9	Mucin-like protein (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000017 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00090 all species →	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036383 all species →	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR000884 all species →	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR36963 all species →	HELICASE	Interproscan

Gene Ontology

No Gene Ontology signature was recorded for XP_048583183.1 in Nematostella vectensis.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_048583183.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_048583183.1 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

35TPM > 0

16Conditions

8.2Max TPM

1.6Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	6.43	8.18
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	4.36	6.30
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	0.50	0.56
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	0.70	0.85
whole 6 week old aboral regenerate · regenerate uncut	3	3	1.63	2.14
whole 6 week old aboral regenerate · regenerate 4hpa	3	1	0.20	0.59
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	4.77	7.71
whole 6 week old aboral regenerate · regenerate 36hpa	3	1	0.19	0.56
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	0.32	0.66
whole 6 week old aboral regenerate · regenerate 20hpa	3	2	0.39	0.71
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	0.50	0.69
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	2.01	3.13
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	2.05	2.34
whole 6 week old aboral regenerate · regenerate 48hpa	3	1	0.24	0.73
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	0.42	0.65
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	0.21	0.62

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	8.18
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	5.90
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	5.22
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	6.30
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	4.09
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	2.69
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	0.56
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	0.48
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	0.45
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	0.85
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	0.83
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	0.43
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	2.14
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	1.61
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	1.14
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.59
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	7.71
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	6.60
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	0.56
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	0.00
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	0.00
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.66
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.31
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.71
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.47
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	0.00
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	0.69
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	0.44
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	0.38
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	3.13
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	2.91
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	2.34
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	2.13
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	1.67
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.73
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.65
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.61
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.62
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.