Gene detail

Detailed information of XP_048583461.1 in Nematostella vectensis

Genomic Location: NC_064038.1:8290515...8300985
NR annotation: XP_048583461.1, protein S-acyltransferase 24 isoform X2 [Nematostella vectensis]
Species abbreviation NVECT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_048727504.1

tctcacaaattAGGCTAGTGACACCTGCCTGATGCGGGTAAAAGTAGACAGCTACGTGCTATGCTAATCAATAGGGATATCAAAGTCTGCAGAGATCTTGTAGCACAGAATGGAGTGAAAATCTTGAGTGAACATGATGAAAAAGGGCACACTCCGTTACACTGGGCAGCACTTGGAGGCCACATCGAAATCCTTAAATTCTTTATAAACTGTGgatctgatgtaaataagccaAGCAAAGCTGACTATGGGCCATACCCCATCCACTGGGCATGTGTCGGAGGTCATATTATGGCTGTGGACTTACTATTACAGAACGGTGCAAATATAGACTCTACTGATAATAAGGGGTGCACTCCTCTGATTATTAGTGCCCAATACGGGCGTGCCATGATGGCGGGGTATCTCATTGGTAAAGGAGCCAAGCCAGTTATATGCGACTGCGAAGGAGATTCACCACTTCATTGGGCGGCATTTAAAGGTCACAGCGAGACAGTGCAGTTACTTCTGTACTCTGGCTTTGATCCCAAACAAAAGGACAAATTTGGTCAGACCCCTCTTCACCTGGCTTGCCTTAGTGGAGATTTACTTACTGTGGAACACATTGTTGATATGGATGTGGATCTCAATGTTCCAGACTCTAATGGCAAAACTCCATTGATGCTGGCATTTGGCAGAAATCATACAGAGGTTATCCACTTCATGCAGAGTAAACTGAATCGATTTGTCAAGTGTAGTATAAGAGATATAGTGTTCGGTCCTCCTGGGCGGTCCAGAGGTGCTCTTATGTTCTACTTTGCTAATCTCTTTTGCTGGGGCTACCCTGTCTATATTTATGATGTGCTGCCTAACACATGGGAGTTTACGCCGACTGCTCATGTGCTATTCATATTGACCAATGTTCTAATGTGGATCACCTTGTATTATGCTAATAAACGAAACCCTGGATATTTACCATGCAACACGGATGAGTATGACAGTGCACTCAGGCAGGTTCGTTTCTTTGATGAGTGGCAGGCAAAAACTGGACAAAACCCTTTGGAGAATTTGTGTCACACATGTCGTCTGGTCCGCCCGCTGAGAGCAAAGCACTGTCGGACATGTAACAGATGTGTCCAGCATTTCGACCACCACTGTCCATATATCAATAACTGTGTGGGGTTAAATAATAGGGCGCCATTTTTCCTGTTTACCGTGTGTGTGTTGGTCTGCTGTTTTATCACACTCTATTTCGCTGTTACTATGCTGGGTGTCTACGGCTTTAGCATCGTCTATTCAATTGGTCTGGTACAATTTGTCATCATCACCTCACTGCTCACAGCGCTTGTTGTTTTCCAGGCTCACCAAATCGGCATCAATATGACTACAAATGAGCGAATCAACAAGAAGCGCTACAAGTATTTACGGGGACCATCCGGGATCTTCACCAATCCGTTCGACCGCGGATATATCAAGAACTGCTTTGAGTTCTTCCACATGGTGCAAGTTCCCAGTAAAAAGCAGAACCTCATGTACAATATATGACACTTTTTACCGCTCTTCTCAAGCAACAAGGACGCCTGACGCGCTTTCCATATGAATGTTTTCCTTTGCAAAATTTGTAGTTGCCCGTTTATACgtagcctccctcgcaggcaCTGAGTGAGCGACCTGCGTAAAAACGCCTGGGAGGGAAGCTCGTTTACAGTCGATTGACAATAGGGACTTTAAGGTGCGTCAACGGCTACGACGGAGTGACCGTGATATAACACTTTAAGGCTTGGCGACAAATTCCTCAATAGTTTCGATAAAATTACCTAGACTTTACATTTAGGAACAAACAGAAATTAACTGTAAGCTTCATTTCTAGCATAGGAAACAGCGAAAAGTTAATTTATACTCCAACCGACCACGTACTCGCCAGACCGTAAAACTTGGAATTTTACGTCGTGTTTTGACGAAGAACGGTTGGAAATCTATCAGGCATTTTCACGAGCAACTTTCAATTCTCCAAttaattccattgttttctacGTCGCCGTACTCGTATCTTAAAGTCCCTGATAGGTTGTCGTAAACCGGCttcgcgactacgcgacaagcccgcaggtaagcatgggtaaaaaccactgaagcgccaACGCGTCTAAACCTGGTGTTATGCGTTGACTAATATATGCAGCAAGGCGCTTCAGTAGTTTtcacccatgcttacatgcgggcttgtcgcgtagtcgcgaagccggttgaggacaaccttttgtcaatcgCCTTTATGCGAGGCTGTACCCATGGTGTAAACGCATCCTTCTTGTTTCTGGTCAGAATTGAATAGGAACGCGAATGTTATTTTGGAATTGCGTCGGTTTTGTAAATGATGGCCATTTCTGAGTCAATACTGTCTGTTAAACCGAGTTGTAGTAAGTTTTAATTTAACATTTTTAAGACCTTTGAATAGGTTTGTAAAGGTCCTTTGAAATC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q52T38	Protein S-acyltransferase 24 OS=Arabidopsis thaliana OX=3702 GN=PAT24 PE=1 SV=1
A5WVX9	Palmitoyltransferase ZDHHC17 OS=Danio rerio OX=7955 GN=zdhhc17 PE=2 SV=1
E9PTT0	Palmitoyltransferase ZDHHC17 OS=Rattus norvegicus OX=10116 GN=Zdhhc17 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005830 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00023 all species →	Ank	Ankyrin repeat	Repeat	Interproscan
PF13606 all species →	Ank_3	Ankyrin repeat	Repeat	Interproscan
PF01529 all species →	DHHC	DHHC palmitoyltransferase	Family	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR001594 all species →	Domain	Palmitoyltransferase, DHHC domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24161 all species →	ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000139 all species →	Cellular Component	Golgi membrane	Interproscan
GO:0016409 all species →	Molecular Function	palmitoyltransferase activity	Interproscan
GO:0018345 all species →	Biological Process	protein palmitoylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20032	ZDHHC13_17, HIP14; palmitoyltransferase ZDHHC13/17	EC:2.3.1.225	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.