Gene detail

Detailed information of XP_048583923.1 in Nematostella vectensis

Genomic Location: NC_064034.1:10631887...10643271
NR annotation: XP_048583923.1, uncharacterized protein LOC116614781 isoform X2 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC116614781

ATGTGCAGCCGTATACCCAAGATTGGTTGCGCGGTATGTATGCACAGTCATAGGTACCCAAGCGTGGATCCAGAAAAAAATTCTGACCTGTTTACGATGAATGTTCCTGAAAATAAAAAGCGTGAAAATAGCAGGCAAGAGAGAAGAGCATTGCTAGTGGGTCCAACATATGAAGGACTTGATAAGAAGTTTCATCTTGAAGGCACTGCTAATGACGTTAAGCTGATAACTGATCTCATCACTCATGCACCATTTTGTTTCCCTCAAGAAAACATCAAGATTCTGGTTGGAGGGGATGCCACAAGATCAAGTATTCTGACAAGTCTTGAAAGCCTTTGTCAGGATGCTGCAGAGGAAAGTGTTGTGCTGTTTTTCTTCTGTGGTCATGGATTCTATCTAAGAGACATCAAGGATGAAGGCATTGTCCCTTCAGATATCACAACAAGAATGTTGATAAACAATGCAGTTAAGGATGTTTGTATCACTGGGAAGGACTTTGCGTCGTATCTGGAGCTGTTGGCATCAAAAGAAGTGTTCACGACGTTGATGTTTGACTGCTGCTATTCTGGTCATGTTTACCGTGATGCAGAGTACAAAGACAGCATGTTTACACCACTTAGACCACGCCAAATTGAGGTAGCCTGTCGTCTCCAATCTCGCTCAAATTCATCTCCAGGGTCACCTTTAGTTGAACCTAGCCTCAATGCACACTTGGAGAACAATAACTTTTCAATGTGGCCTCGTTCAGGCTGGAGACCTTCTCGTGCTGATAGATTTGTCCACATTGCTGCTTGTTCTTCTGCGGAGAAGGCATATGAGGGAGTTGATCACTATACGGACACAACATGTGGGCTACTAACCTGTGCTGTCAGAAGAGTGTTTGGCAAGTTGTCACATCCAGAAAAGGTGTCCTATAAAGTGTTATGCAGCCTAATAATGCGGGAGTTCAAGGAACTGCATGTTTCTGTCAAACAGACACCACAGTTTGAAGGAGGCAATCTTAACACTAGGGTGTTCGATAGAATTACAGTTCCAGATGTCCATGTCAGTGGTGTCCCTGTGGACCGTGTGTTTCGAAATGGGTCACGTGATGAGGTCATTCTAGAAGCGGGTATCTTGCAGCTATTACGTGACGGAGAGTATGAAGTGTTTGAGCCTACAGTCACCAAGGAAGAGTTGGCATGCGGTAACAGCACTGAGAAGTGGGTGGCGAGGATAGACGTGAATCAGTATGACATCTTCGAGACGCAAGCACTCGCGTTAGTCGTAGAAAAAGCAAAAGATATACGGCCTGGGTGTTTGGCATTCCTGCGCGAAGCTAGGAGCGTAAGGCACAAAGTCCGAGTGCATCAGAGTACCAATCACGTGAACGACACGTGCGAGTTGCTGACTCAGCTAAAGACTGCTCAAATGTTCCACGTGGAATGCAGTTCAACGGAAGAGGAAGAACACTTTACTTCAGCTGCAGATGATACGTTTGGTCACATGGACACGATAACGTTGATGAACTTCCATAATGCCATTGGTTTATCGCAGAATAAGATATTGAATGACGATAATAAAAAAGTCACGAATAACCAGGAATCGCATACTCAAACTACTGTATATCGACCTGAATGCCGACGAGAGAGTGGATCTCAGACTAGCGACGACATCATTCATGTCTCGCCCGAACAAGTGCACACAAGCAAAGCGTTCTGGGTCGCTCGACGCAGAGGCAAGATGATCACTCCGCCAATAAGCCTGGGGCGAGAGCACGTCGTAGTTGACAACCTGTGTCGGTTGCTAAGATATGAGATGGCCTTAGCGAATGCTGATATCGCTTTTGGTTCCATGATAAACGTGACGTTCAAAGTCTCTAGGCTGGAAAGGGTGCAACCATACCGAGCTGGCCTGGAAAAGAGTCAAAGAATTCGAGAGGGACTGAGTGCCGGGGATTTATATGAAGGCGGTCCCGTGACTGAGCGGCCTCGGTTCCGTGCGCACCTTGTGACTCAGCGGTCTGACCGTGGGCGCGTCAGGCTAGTCCCAGTGCCCTGCTCAGGTGACGCACTTGTGTTCCAGGTCACCAATAATGAAGATCACGTGATCCATGTCTGTGTATTAATGTTCCAACTGGATGGTTCGGTCGTTTCTTTGTACCCAGATTCTAACGGGAGAACACAAGAGCTGCGGCCCGGGGATTCGATAGAAGACATTCATCGTCTCTTCATACCTGATCACTCCCTGCGCGGGATCGCCCGTCCAGACCCGCGGGACCCCGAGCCTCGTTACGGTGTCGATACCGTCGTGCTTTTCGCGACAAGTGAGGAAGCATCCTATTTAGCGTTGCTTCAAACGCCATTGGAAACCGAGCCAGAACTCGTGCCCAGGGCCCTGGATAAGCAGACACCGTTGCATCCACTCAGAAAGTTTCGTCTTGCTTTGACCAACCGCTGTAGTCTGGATGCTCAGTGCGACAGCGGGCCCGCCTGGCAAGTCATGAAACGAGAGTTCGAGGTCTGGAAACATCCTCAACATCAGTAA

Transcript

rna-XM_048727966.1

aatgcaaatgatgTAAATGAATCGAGTTTATAGTTCATCTGCATTTgtatgcatttgcattgaatactcatgggataatacgacgtttgaacttagtctAAAACCACCTGCGGAGGTGCGTGCAAACATTGCTAGCCCTTTAACGCTCGATTGACTACAATACAAATAAGAAGATGTTGGCGGCCTTATCAGTCCAGCGTTCATGTTATTTGTGTTAGCACCATGTGCAGCCGTATACCCAAGATTGGTTGCGCGGTATGtatgcacagtcataggtaccCAAGCGTGGATCCAGAAAAAAATTCTGACCTGTTTACGatgaATGTtcctgaaaataaaaagcgTGAAAATAGCAGGCAAgAGAGAAGAGCATTGCTAGTGGGTCCAACATATGAAGGACTTGATAAGAAGTTTCATCTTGAAGGCACTGCTAATGACGTTAAGCTGATAACTGATCTCATCACTCATGCACCATTTTGTTTCCCTCAAGAAAACATCAAGATTCTGGTTGGAGGGGATGCCACAAGATCAAGTATTCTGACAAGTCTTGAAAGCCTTTGTCAGGATGCTGCAGAGGAAAGTGTTGTGCTGTTTTTCTTCTGTGGTCATGGATTCTATCTAAGAGACATCAAGGATGAAGGCATTGTCCCTTCAGATATCACAACAAGAATGTTGATAAACAATGCAGTTAAGGATGTTTGTATCACTGGGAAGGACTTTGCGTCGTATCTGGAGCTGTTGGCATCAAAAGAAGTGTTCACGACGTTGATGTTTGACTGCTGCTATTCTGGTCATGTTTACCGTGATGCAGAGTACAAAGACAGCATGTTTACACCACTTAGACCACGCCAAATTGAGGTAGCCTGTCGTCTCCAATCTCGCTCAAATTCATCTCCAGGGTCACCTTTAGTTGAACCTAGCCTCAATGCACACTTGGAGAACAATAACTTTTCAATGTGGCCTCGTTCAGGCTGGAGACCTTCTCGTGCTGATAGATTTGTCCACATTGCTGCTTGTTCTTCTGCGGAGAAGGCATATGAGGGAGTTGATCACTATACGGACACAACATGTGGGCTACTAACCTGTGCTGTCAGAAGAGTGTTTGGCAAGTTGTCACATCCAGAAAAGGTGTCCTATAAAGTGTTATGCAGcctaATAATGCGGGAGTTCAAGGAACTGCATGTTTCTGTCAAACAGACACCACAGTTTGAAGGAGGCAATCTTAACACTAGGGTGTTCGATAGAATTACAGTTCCAGATGTCCATGTCAGTGGTGTCCCTGTGGACCGTGTGTTTCGAAATGGGTCACGTGATGAGGTCATTCTAGAAGCGGGTATCTTGCAGCTATTACGTGACGGAGAGTATGAAGTGTTTGAGCCTACAGTCACCAAGGAAGAGTTGGCATGCGGTAACAGCACTGAGAAGTGGGTGGCGAGGATAGACGTGAATCAGTATGACATCTTCGAGACGCAAGCACTCGCGTTAGTCGTAGAAAAAGCAAAAGATATACGGCCTGGGTGTTTGGCATTCCTGCGCGAAGCTAGGAGCGTAAGGCACAAAGTCCGAGTGCATCAGAGTACCAATCACGTGAACGACACGTGCGAGTTGCTGACTCAGCTAAAGACTGCTCAAATGTTCCACGTGGAATGCAGTTCAACGGAAGAGGAAGAACACTTTACTTCAGCTGCAGATGATACGTTTGGTCACATGGACACGATAACGTTGATGAACTTCCATAATGCCATTGGTTTATCGCAGAATAAGATATTGAATGACGATAATAAAAAAGTCACGAATAACCAGGAATCGCATACTCAAACTACTGTATATCGACCTGAATGCCGACGAGAGAGTGGATCTCAGACTAGCGACGACATCATTCATGTCTCGCCCGAACAAGTGCACACAAGCAAAGCGTTCTGGGTCGCTCGACGCAGAGGCAAGATGATCACTCCGCCAATAAGCCTGGGGCGAGAGCACGTCGTAGTTGACAACCTGTGTCGGTTGCTAAGATATGAGATGGCCTTAGCGAATGCTGATATCGCTTTTGGTTCCATGATAAACGTGACGTTCAAAGTCTCTAGGCTGGAAAGGGTGCAACCATACCGAGCTGGCCTGGAAAAGAGTCAAAGAATTCGAGAGGGACTGAGTGCCGGGGATTTATATGAAGGCGGTCCCGTGACTGAGCGGCCTCGGTTCCGTGCGCACCTTGTGACTCAGCGGTCTGACCGTGGGCGCGTCAGGCTAGTCCCAGTGCCCTGCTCAGGTGACGCACTTGTGTTCCAGGTCACCAATAATGAAGATCACGTGATCCATGTCTGTGTATTAATGTTCCAACTGGATGGTTCGGTCGTTTCTTTGTACCCAGATTCTAACGGGAGAACACAAGAGCTGCGGCCCGGGGATTCGATAGAAGACATTCATCGTCTCTTCATACCTGATCACTCCCTGCGCGGGATCGCCCGTCCAGACCCGCGGGACCCCGAGCCTCGTTACGGTGTCGATACCGTCGTGCTTTTCGCGACAAGTGAGGAAGCATCCTATTTAGCGTTGCTTCAAACGCCATTGGAAACCGAGCCAGAACTCGTGCCCAGGGCCCTGGATAAGCAGacaCCGTTGCATCCACTCAGAAAGTTTCGTCTTGCTTTGACCAACCGCTGTAGTCTGGATGCTCAGTGCGACAGCGGGCCCGCCTGGCAAGTCATGAAACGAGAGTTCGAGGTCTGGAAACATCCTCAACATCAGTAAAGCCTTTCCCATGCTAGAAA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004381 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00656 all species →	Peptidase_C14	Caspase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011600 all species →	Domain	Peptidase C14, caspase domain	Interproscan
IPR050452 all species →	Family	Metacaspase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48104 all species →	METACASPASE-4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004197 all species →	Molecular Function	cysteine-type endopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_048583923.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.