Gene detail

Detailed information of XP_048584020.1 in Nematostella vectensis

Genomic Location: NC_064038.1:12885588...12895829
NR annotation: XP_048584020.1, WD repeat-containing protein 41 isoform X3 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
O94394	Uncharacterized WD repeat-containing protein C126.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC126.01c PE=4 SV=2

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040102	Family	WD repeat-containing protein 41	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22805	WDR41-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005765	Cellular Component	lysosomal membrane	Interproscan
GO:0010506	Biological Process	regulation of autophagy	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23610	WDR41; WD repeat-containing protein 41	-	Membrane trafficking	ko04131	deepkoala