Detailed information of XP_048584043.1 in Nematostella vectensis

Genomic Location: NC_064038.1:12607951...12637949
NR annotation: XP_048584043.1, dmX-like protein 2 isoform X2 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8BPN8DmX-like protein 2 OS=Mus musculus OX=10090 GN=Dmxl2 PE=1 SV=3
Q8TDJ6DmX-like protein 2 OS=Homo sapiens OX=9606 GN=DMXL2 PE=1 SV=2
Q9Y485DmX-like protein 1 OS=Homo sapiens OX=9606 GN=DMXL1 PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12234Rav1p_CRAVE protein 1 C terminalFamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR022033DomainRAVE complex protein Rav1 C-terminalInterproscan
IPR052208FamilyDmX-like/RAVE complex componentInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13950RABCONNECTIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007035Biological Processvacuolar acidificationInterproscan
GO:0043291Cellular ComponentRAVE complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24155DMXL, DMX, RAV1; rabconnectin-3a-Membrane traffickingko04131deepkoala

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