Genomic Location: NC_064039.1:283724...326708
NR annotation: XP_048584428.1, uncharacterized protein LOC5511487 isoform X2 [Nematostella vectensis]
| CDS | ||||
| LOC5511487 | ||||
| Transcript |
| rna-XM_048728471.1 |
| Protein |
| XP_048584428.1 |
| Uniprot term | Description | |||
|---|---|---|---|---|
| Q9YGL3 | Nuclear receptor subfamily 2 group E member 1 OS=Oryzias latipes OX=8090 GN=nr2e1 PE=2 SV=1 | |||
| Q06726 | Nuclear receptor subfamily 2 group F member 5 OS=Danio rerio OX=7955 GN=nr2f5 PE=2 SV=1 | |||
| Q9Y5X4 | Photoreceptor-specific nuclear receptor OS=Homo sapiens OX=9606 GN=NR2E3 PE=1 SV=1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | ESR-like |
| Transcription Factors Family | Miscellaneous |
| Transcription Factors Family | RXR-like |
| Transcription Factors Family | GCNF-like |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00104 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor | Domain | Interproscan |
| PF00105 | zf-C4 | Zinc finger, C4 type (two domains) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001628 | Domain | Zinc finger, nuclear hormone receptor-type | Interproscan |
| IPR013088 | Homologous_superfamily | Zinc finger, NHR/GATA-type | Interproscan |
| IPR000536 | Domain | Nuclear hormone receptor, ligand-binding domain | Interproscan |
| IPR035500 | Homologous_superfamily | Nuclear hormone receptor-like domain superfamily | Interproscan |
| IPR001723 | Family | Nuclear hormone receptor | Interproscan |
| IPR050274 | Family | Nuclear hormone receptor family NR2 subfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24083 | NUCLEAR HORMONE RECEPTOR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003700 | Molecular Function | DNA-binding transcription factor activity | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0043565 | Molecular Function | sequence-specific DNA binding | Interproscan |
| GO:0000978 | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0004879 | Molecular Function | nuclear receptor activity | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0030154 | Biological Process | cell differentiation | Interproscan |
| GO:0048856 | Biological Process | anatomical structure development | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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