Detailed information of XP_048585197.1 in Nematostella vectensis

Genomic Location: NC_064039.1:1818...5921
NR annotation: XP_048585197.1, lamin-B1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4R899Lamin tail domain-containing protein 1 OS=Macaca fascicularis OX=9541 GN=LMNTD1 PE=2 SV=1
Q8N9Z9Lamin tail domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LMNTD1 PE=1 SV=2
Q9D4C1Lamin tail domain-containing protein 1 OS=Mus musculus OX=10090 GN=Lmntd1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002850 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00932
all species →
LTDLamin Tail DomainDomainInterproscan
PF00038
all species →
FilamentIntermediate filament proteinCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001322
all species →
DomainLamin tail domainInterproscan
IPR039008
all species →
DomainIntermediate filament, rod domainInterproscan
IPR036415
all species →
Homologous_superfamilyLamin tail domain superfamilyInterproscan
IPR042840
all species →
FamilyLamin tail domain-containing protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47012
all species →
LAMIN TAIL DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005635
all species →
Cellular Componentnuclear envelopeInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for XP_048585197.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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