Gene detail

Detailed information of XP_048585994.1 in Nematostella vectensis

Genomic Location: NC_064040.1:13057398...13063557
NR annotation: XP_048585994.1, gamma-butyrobetaine dioxygenase isoform X3 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q924Y0	Gamma-butyrobetaine dioxygenase OS=Mus musculus OX=10090 GN=Bbox1 PE=1 SV=1
Q9QZU7	Gamma-butyrobetaine dioxygenase OS=Rattus norvegicus OX=10116 GN=Bbox1 PE=1 SV=1
Q91ZE0	Trimethyllysine dioxygenase, mitochondrial OS=Mus musculus OX=10090 GN=Tmlhe PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02668	TauD	Taurine catabolism dioxygenase TauD, TfdA family	Domain	Interproscan
PF06155	GBBH-like_N	Gamma-butyrobetaine hydroxylase-like, N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050411	Family	Alpha-ketoglutarate-dependent hydroxylases	Interproscan
IPR003819	Domain	TauD/TfdA-like domain	Interproscan
IPR038492	Homologous_superfamily	GBBH-like, N-terminal domain superfamily	Interproscan
IPR042098	Homologous_superfamily	Taurine dioxygenase TauD-like superfamily	Interproscan
IPR010376	Domain	Gamma-butyrobetaine hydroxylase-like, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10696	GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0045329	Biological Process	carnitine biosynthetic process	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan