Gene detail

Detailed information of XP_048586294.1 in Nematostella vectensis

Genomic Location: NC_064040.1:4780839...4785477
NR annotation: XP_048586294.1, uncharacterized protein LOC5504306 isoform X2 [Nematostella vectensis]
Species abbreviation NVECT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_048730337.1

ATTCTGAGTCGTTTTAAGTTTTTAATCTTAATTTGTATGACTTCCTGGACAAGCAATTCAATTTTCTGACCGGTAGCATTGTTTTATGCAAAATAATAATGTTCGATTAGCCTTTATTCAAATAGTCTCTTGGCGACGGTCGACTCCAAAACCCTTCAATGTAACACCGAATCCCTCTGATTTAACACCGAACCCCTCCGATACAACACCGAATCCCTCCGATACAACACCGAATCCCTCCGATTTAACACCGTATCCCTCCGATACAACACCGAATCCCTCCGATTTAACACCGAAATCCTCCGATACAACACCGAATCCCTCCGATTTAACACCGAACCCCTCCAATACAACACCGAAACCCTCCGATTCAACACAGAACCCCTCCGATACAACACTGAATCCCTCCATTTTAACACCGAAACCCTCCGATACAACACCGAATCCCTTCGATTTTACACCGTATCCCTCCGATACAACACCGAATCCCTCCGATTTAACACCGAAATCCTCCGATACAACACCAAATCCCTTCGATTTAACACCGAACCCCTCCAATACAACACCGAAACCCTCCGATTCAACACAGAACCCCTCCGATACAACACTTAATCCCTCCATTTTAACACCGAAACCCTCCGATACAACACCGAATCCCTCCGGGATTCAACACCAATCCCCCACCCCGATTCAATTGAACGCAAAATATGGAGGTTAGATAGCCTAGTATTCGTAGCCATATGTCGATTCAAGCACAttttcgtgaaaaaaaaaaaaaaaaacgccaaAGACATCCGCAACGCCACTGGCGTGtagcgggggaggggtatagaTGTTTTATATAAGACTTTACCTTTTGGCGGTTGAGGGGTGCTGCTCGCGCACCCTCTCGCACAACCTCTTTCAACCCCTTCCCTCTATACAAGACCGAGACTGCGACGGTAGCTCTGCTTTGTGCACATTATGAAATAGCCAGTGTGACAACATATTCGTTTAGAAATCCCCATTTAAAGGATATTTTTGCGATTAGTTTCTAAGACTTGCTACGTTAGATATACAGAGTTATTGTTCTAATTTCTAATAAATGTCAACGCATACACCATGATTAGGTTGTGTGAGTCTTTTAATTACCATTATATGAAGTAGTAACTAGAAGGGTTGAAACCATTGgtaaacttttaaaatgacGGTGTAGACGGAGTGTAATttagcggcgtagccaggatttttaacaggagggggcccaaaaggcaaTTTCAAGgtattttctgtattttagataatgtctcatacatttactgcaCCTCTGGTTTTCTTCTATCCTCTGCTCACGATGCTAGGTTTAAGGCATCCCCCTcccttgtttttattataatctgttttcttgtatattcattcTGATATTTCTAGCACAGGGTGCGGACATTATAACTTGATTTGTCGATTTTGTACGCCGCAAGGCGCAAGGCTCCTTTCTCACAACCTGATCCAATATCGCGATAGCTTTAATTGAAAAATTTCTATATCAAGACCAGCCGCATATTAGGGGTCGAGCTCGGTCGGCATGGGTCTGTTGATGAGAAAATCTCTCAGAGACAATGCTAAAACTGATGGCTACCCACATCGAGTTCCCTCACTAAGGTTTTATAACACTGACGATTCCGCAAAGATAACGATGGATGTCAGCACAGTCGGGCGAGAACTTGAAAGCTACATAAATAGTAAGCTACATGCGGCTACTTTCGTCCCTAACGACATTGCCCTTAACAGCAAGAGAAGCATCCACGCAAGCCCTAACGCTATAAGATCATTACAAGGGACAGAACAACAAGGACACCAATACGTGACCCTGACCAGTCTCCTAAGCCAAGACGTCCCTTACGGCGCAATGCTCCTCGAGTTCCCTTCAAGCTCCAACACTAGTTTAGAGTTTGTAAACAGCGAGAGATTTCTCATTTACGATTTCCCTCCACCAGCGGCGATATACAACGAGTACCTGTTACCACTTAGGGCGTGTCCGGTGGCGGGGGACAGTATCCCCTTACTCCTCCGCGGGGCccctagccactccctaaGCCAACACTGGTTAAAATGGGTACCAGGTTTCACTCCGCCATTTATCAAGCATATACATGAGGTTATGGATTATGACGACATAGTGACGTCATTTCCGCATCAAATGATCCCCTCCTGCAAGCATGCAGTCGACCCGGAAGTACATTATAAGTTGCTGTCGAAAAACAGCATCCCCGAGATGGGGGCACATACTCCGCATCACATGACCATGGAAAACCAcgccctgccgtgtatggtaAAGGCCGCACACGGAAAAGGCACCAAGGGCACATTTAAAGCAGACACGGAGCAAGAACTGGAACAGATCTTGGTCGAGCTGCGAAATAATCTTCAGCGATGTGAGCCTCCTATACTAACGGAGGTCATCGAGGACATTGATGGAAATTACTGTTTACAGTTCTATCTGCATAAGTCCGGGGAGATTTATTGGCTGGGTGTGACTACCCAAATTATGGGTGATAAATTTGTGtggggtggtggggtggtggatTGGACGAAGCAATTGTACCTCAGGGGGCTCCTGTGGGGCACGATTTGTCCTGTAAAGGAGTACCTGCACAAGCAAGGGTATTTTGGAATAGTTGGGATCGATGTGTTGACGAGTAAGAGAGGCAAGTTCGTAATCGATGTGAACCCGAGGATCAACGGGACGACGCCTCAACTCTTTCTTGCGCCGCGTATGGCAGACCTCGGTTATGGGTTGTCTGTGTACATCGCAGATGGGAGGTTCTTGTGCACTTCAGAGAGCCTGGTACAGAGGGCAGATGTATTGAATTCTACAGGGGAGGTCAGGGTAGTGGTTTTGTCTTCAGCTGACATAAGGGATGGGTGTGAGGCACACGTGGTCGTGTTTGGTGAATCTGAAGAAAAGGCGAGTGAAGGCTTTAAAAGGTTGAAAAAATGTCGCTTATAACTCTTACTAGGTTTTAGCTCTTTTTTTAGTCTTGTCAGTATCTATAGAATCAATATGGCGTGTAATAAATGGTTGGccaacagaaaaaaa

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001168 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02655 all species →	ATP-grasp_3	ATP-grasp domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011761 all species →	Domain	ATP-grasp fold	Interproscan
IPR053269 all species →	Family	L-aspartate--L-methionine ligase	Interproscan
IPR003806 all species →	Domain	ATP-grasp fold, PylC-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37018 all species →	CULTURE SPECIFIC PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G00130)-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_048586294.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.