Gene detail

Detailed information of XP_048587167.1 in Nematostella vectensis

Genomic Location: NC_064041.1:6665851...6710229
NR annotation: XP_048587167.1, dynamin-1 isoform X1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5515229

ATGGGGAATAAAGGGATGGAAGATCTGATACCAATAGTCAACAAAATTCAAGACGCTTTTGCCTCTATCGGGTACAGCTCTATGATAGATCTGCCACAAATTGCTGTAGTTGGTTCACAGAGTGCGGGGAAAAGCAGCGTTTTAGAGAACTTCGTTGGGAAGGATTTTTTGCCCCGGGGCTCTGGTATTGTGACAAGAAGACCCTTGATTCTGCAACTACAACCTTCGAAAAGCGAGTATGCTGAGTTTCTTCACTGTAGGAACAAAAAATTCACAGACTTTGGCGAAGTGCAAAAGGAAATTGTCGCTGAAACGGACAGAGTGACTGGTGGCAACAAGGGAATCTCAAATATACCAATAAACTTGAGAGTGTATTCTCCAAGTGTTTTAAGCCTGACGCTGGTCGATCTTCCTGGAATGACGAAAGTTCCTGTTGGTGACCAGCCAGCAGATATTGAATTCCAGATAAGGTCCATGCTATTGGAGTTCATTACCAAGGAAAACTGCCTAATCCTGGCCGTGTCACCAGCAAACAGTGATCTGGCAAACTCAGATGCACTCAAAATTGCACGAGAGGTTGATCCCCAAGGGGCCCGTACTATTGGTGTCATCACCAAACTGGACTTGATGGATGAGGGGACTGATGCGCGTGATATTCTTGAGAACAGAGTCCTTCCCCTCAGGAGAGGTTACATCGGCATTGTAAATAGAAGCCAAGCTGATATTGATGGTAGGAAAGACATAAGGGCCGCACTGGCAGCAGAACGTAAATTTTTTCTCAGTAACCCATCCTATAGGCATATGGCAGACAAGATGGGGACACAATATTTGCAAAAAGTTTTAAATCAGCAACTGACAAATCATATAAAAGACACACTTCCTGCTCTGAGGAGCAAGCTTCAAGATAACCTACTTGCTTTGGAGAAGGAAGTGAAAGGCTACGAGAATTACAATCCTAGGGATCTGTCAGTCAGAACAAAAGCCCTCATGCAGATGATGCAAACATTTAGTGCCGATTTTGAGAAAGCAATTGAAGGGTCTGGAGACTCTATTAACACGGTGGAGCTATCTGGTGGTGCCAAAATCAACCGAATCTTCCATGAGCGCTTCCCTTATGAGTTAGTCAAGATGGAGTTTGATGAAAAACAGCTTAGAAGAGAAATCATGTTTGCCATAAAAAATATTCATGGTATTAGGGTTGGGCTTTTTACTCCAGACATGGCATTTGAGGCCATTGTTAAACGGCAAATTGACAAACTGCGCTCACCAGCCATCAAGTGTGTGGATATGGTGATGACGGAACTAACATCTGTCATTCAGAAATGCGCCACTCAGATGGCCAAGTACCCATTGCTCCGAGATCAAGTAGAGCGTATTGTTATCGATCACATCAGGAGTAATGAGGTCACAACTAAGGAACAGGTCCAGACTTTCATTGAGTTGGAACTAGCCTACATCAACACCAACCATCCGGACTTTGTTGGTTTTGCAGAAGCACAGGCCTCGGCGTCAAATTATGAGAAGAAAAAGACCAGGGTCACTAACCAGATCATACGCAAGGGGTGGCTCACCGTATCACAGGCTGGGTTTATGAAAGGTGTTGGCATGGGCTCCAAAGAGTACTGGTTTGTTTTGACAGCTGAAACCTTGACGTGGTATAAGGATGAGGAGGAAAAAGAGACAAAATACCAGCTCCGCCTAGATGGTGTAAGGTTGCGAGACTTGGAGGCAGGCTTCATGTCCAAAAGGGTCTCATTTGCCCTCTTTAACCCTGACACAAAGAACCTGTTTAAGGACCACAAGCAGCTTGAGCTGTCGGCAGATAATCAGGAGACGGTGGACAGCTGGAAGGCGTCATTTCTACGCGCTGGTGTCTATCCTGAAAGAGAGAGCTCAGAGGATAAGAGCCTTCAAGGGGAGATTGGCACGCTGGACCCACAGATGGAACGGCAGGTGGAGACCATCCGCAACCTGGTGGACTCTTACATCCGTATCGTCAGCAAGACCATACGGGACCTTGTGCCCAAGACCATCATGTACATGATCATAAATAACATAAAAGAATTCATTGCCGCAGAGTTGCTTGCGCATCTTTACTCCTCTGGGAATGTGAGTGACCTCATGGAGGAGAGTGAGGAAGAAGCCCAGCGCCGCGAAGAGATGCTCAAGATGTATCACAGCACCAAAGAGGCCTTGCAGATCGTGGGCGACATTGACACACATACCATTTCAATTCCAACCCCACCCCCCGTGGACAATAGCGACTTTGATCCAAGGGGATCTTATCACAGCCCTCAAGTGCCTAGACGCCCTATGTCATCAGGTGGTGCGCTCCCTGCGCCACCCTCACGGCCTTCAGCCCCAAGCCGCCCAGCTCCCTCCCGGCCCGACAGGGAACTCAGGAGACCACCAGCCCCTCCTAAACCAGGCGGAGCACCCCCAATTCCGGGTCGTCCACCAATCCCGTCGCGTCCTACGTAA

Transcript

rna-XM_048731210.1

CGCGAAAGGCGGCTCTTATTTCCGTTTCGCCGGGCCTCTGGAGTTCAAGAAAACTTGTAAAGTCTGCAAAAGAACGCATTGAAATCCCCTTTGTCCTTATAAACTCCACAATTTGAGCCACTTCCGAGTGGCTTTAGATAGTCTGCCGTCATGGGGAATAAAGGGATGGAAGATCTGATACCAATAGTCAACAAAATTCAAGACGCTTTTGCCTCTATCGGGTACAGCTCTATGATAGATCTGCCACAAATTGCTGTAGTTGGTTCACAGAGTGCGGGGAAAAGCAGCGTTTTAGAGAACTTCGTTGGGAAggaTTTTTTGCCCCGGGGCTCTGGTATTGTGACAAGAAGACCCTTGATTCTGCAACTACAACCTTCGAAAAGCGAGTATGCTGAGTTTCTTCACTGTAGGAACAAAAAATTCACAGACTTTGGCGAAGTGCAAAAGGAAATTGTCGCTGAAACGGACAGAGTGACTGGTGGCAACAAGGGAATCTCAAATATACCAATAAACTTGAGAGTGTATTCTCCAAGTGTTTTAAGCCTGACGCTGGTCGATCTTCCTGGAATGACGAAAGTTCCTGTTGGTGACCAGCCAGCAGATATTGAATTCCAGATAAGGTCCATGCTATTGGAGTTCATTACCAAGGAAAACTGCCTAATCCTGGCCGTGTCACCAGCAAACAGTGATCTGGCAAACTCAGATGCACTCAAAATTGCACGAGAGGTTGATCCCCAAGGGGCCCGTACTATTGGTGTCATCACCAAACTGGACTTGATGGATGAGGGGACTGATGCGCGTGATATTCTTGAGAACAGAGTCCTTCCCCTCAGGAGAGGTTACATCGGCATTGTAAATAGAAGCCAAGCTGATATTGATGGTAGGAAAGACATAAGGGCCGCACTGGCAGCAGAACGTAAATTTTTTCTCAGTAACCCATCCTATAGgCATATGGCAGACAAGATGGGGACACAATATTTGCAAAAAGTTTTAAATCAGCAACTGACAAATCATATAAAAGACACACTTCCTGCTCTGAGGAGCAAGCTTCAAGATAACCTACTTGCTTTGGAGAAGGAAGTGAAAGGCTACGAGAATTACAATCCTAGGGATCTGTCAGTCAGAACAAAAGCCCTCATGCAgATGATGCAAACATTTAGTGCCGATTTTGAGAAAGCAATTGAAGGGTCTGGAGACTCTATTAACACGGTGGAGCTATCTGGTGGTGCCAAAATCAACCGAATCTTCCATGAGCGCTTCCCTTATGAGTTAGTCAAGATGGAGTTTGATGAAAAACAGCTTAGAAGAGAAATCATGTTTGccataaaaaatattcatgGTATTAGGGTTGGGCTTTTTACTCCAGACATGGCATTTGAGGCCATTGTTAAACGGCAAATTGACAAACTGCGCTCACCAGCCATCAAGTGTGTGGATATGGTGATGACGGAACTAACATCTGTCATTCAGAAATGCGCCACTCAGATGGCCAAGTACCCATTGCTCCGAGATCAAGTAGAGCGTATTGTTATCGATCACATCAGGAGTAATGAGGTCACAACTAAGGAACAGGTCCAGACTTTCATTGAGTTGGAACTAGCCTACATCAACACCAACCATCCGGACTTTGTTGGTTTTGCAGAAGCACAGGCCTCGGCGTCAAATTATGAGAAGAAAAAGACCAGGGTCACTAACCAGATCATACGCAAGGGGTGGCTCACCGTATCACAGGCTGGGTTTATGAAAGGTGTTGGCATGGGCTCCAAAGAGTACTGGTTTGTTTTGACAGCTGAAACCTTGACGTGGTATAAGGATGAGGAGGAAAAAGAGACAAAATACCAGCTCCGCCTAGATGGTGTAAGGTTGCGAGACTTGGAGGCAGGCTTCATGTCCAAAAGGGTCTCATTTGCCCTCTTTAACCCTGACACAAAGAACCTGTTTAAGGACCACAAGCAGCTTGAGCTGTCGGCAGATAATCAGGAGACGGTGGACAGCTGGAAGGCGTCATTTCTACGCGCTGGTGTCTATCCTGAAAGAGAGAGCTCAGAGGATAAGAGCCTTCAAGGGGAGATTGGCACGCTGGACCCACAGATGGAACGGCAGGTGGAGACCATCCGCAACCTGGTGGACTCTTACATCCGTATCGTCAGCAAGACCATACGGGACCTTGTGCCCAAGACCATCATGTACATGATCATAAATAACATAAAAGAATTCATTGCCGCAGAGTTGCTTGCGCATCTTTACTCCTCTGGGAATGTGAGTGACCTCATGGAGGAGAGTGAGGAAGAAGCCCAGCGCCGCGAAGAGATGCTCAAGATGTATCACAGCACCAAAGAGGCCTTGCAGATCGTGGGCGACATTGACACACATACCATTTCAATTCCAACCCCACCCCCCGTGGACAATAGCGACTTTGATCCAAGGGGATCTTATCACAGCCCTCAAGTGCCTAGACGCCCTATGTCATCAGGTGGTGCGCTCCCTGCGCCACCCTCACGGCCTTCAGCCCCAAGCCGCCCAGCTCCCTCCCGGCCCGACAGGGAACTCAGGAGACCACCAGCCCCTCCTAAACCAGGCGGAGCACCCCCAATTCCGGGTCGTCCACCAATCCCGTCGCGTCCTACGTAATATCGCACTCTGATTGGTGGCTCTAGCGTGCAAGGGCGGCGATGATTGGTCAGATACTTTAATTTGGTGCTTTTTACTTAGGATGGGGTGGTTTTGATACtcaccttaaaaaaaaaaaaacggccaGCCACTGTCATTTGAATAGGGGAAAGTGGTGATACTCACTCAAACTTCGTCAGTGCGTCAGGGCTACAATTACGACACCATCGGGTGATTTTGAGATCCATGTCAAGTCAAGGACAAAGCTCCCTGCTGAGTCCCTATGGAGTTGTCAATAAATACACCGGGTCAATCCAAGAACGCTAAGAATTCACACTAGAGACAACCTTTACGGCTCTATTGTAAATTCAGCAAATCATAGTTGTCCATTTGTTTGTTGCGATTTTTCTCTAatgaaataatataatttggAATGCTTTTATAATTAATTCAAGCCGGATCCCTTCTGGTTCCAGCTCTGTAAAGTGTGGCTATGGAATGCTTGTATCAAAATCGTGGTATACTGTAGATGTACAATTagttaattaaaaaatatcaagagTCTCGTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P21575	Dynamin-1 OS=Rattus norvegicus OX=10116 GN=Dnm1 PE=1 SV=2
Q08DF4	Dynamin-1 OS=Bos taurus OX=9913 GN=DNM1 PE=1 SV=1
P39053	Dynamin-1 OS=Mus musculus OX=10090 GN=Dnm1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001381 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01031 all species →	Dynamin_M	Dynamin central region	Family	Interproscan
PF02212 all species →	GED	Dynamin GTPase effector domain	Family	Interproscan
PF00169 all species →	PH	PH domain	Domain	Interproscan
PF00350 all species →	Dynamin_N	Dynamin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003130 all species →	Domain	Dynamin GTPase effector	Interproscan
IPR022812 all species →	Family	Dynamin	Interproscan
IPR000375 all species →	Domain	Dynamin stalk domain	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR019762 all species →	Conserved_site	Dynamin, GTPase region, conserved site	Interproscan
IPR001401 all species →	Domain	Dynamin, GTPase domain	Interproscan
IPR045063 all species →	Domain	Dynamin, N-terminal	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR020850 all species →	Domain	GTPase effector domain	Interproscan
IPR030381 all species →	Domain	Dynamin-type guanine nucleotide-binding (G) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11566 all species →	DYNAMIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005874 all species →	Cellular Component	microtubule	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01528	DNM1_3; dynamin 1/3	EC:3.6.5.5	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_048587167.1 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

42TPM > 0

16Conditions

28.7Max TPM

14.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	17.64	18.95
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	13.08	16.78
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	15.74	17.52
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	16.64	19.10
whole 6 week old aboral regenerate · regenerate uncut	3	3	11.50	12.64
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	13.39	23.14
whole 6 week old aboral regenerate · regenerate 120hpa	3	3	21.43	28.66
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	17.08	19.02
whole 6 week old aboral regenerate · regenerate 24hpa	3	3	16.93	19.05
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	14.94	18.43
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	15.45	17.30
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	12.28	18.44
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	18.54	20.40
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	14.04	22.20
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	12.10	18.57
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	5.42	16.26

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	18.95
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	18.54
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	15.42
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	16.78
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	11.46
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	11.02
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	17.52
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	15.28
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	14.40
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	19.10
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	17.89
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	12.94
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	12.64
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	11.11
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	10.75
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	23.14
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	17.04
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	28.66
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	20.32
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	15.31
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	19.02
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	17.09
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	15.14
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	19.05
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	16.91
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	14.85
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	18.43
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	17.76
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	8.63
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	17.30
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	15.39
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	13.66
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	18.44
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	18.41
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	20.40
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	17.65
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	17.56
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	22.20
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	19.93
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	18.57
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	17.73
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	16.26
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.