Gene detail

Detailed information of XP_048587480.1 in Nematostella vectensis

Genomic Location: NC_064041.1:11292195...11294521
NR annotation: XP_048587480.1, torsin-1A-interacting protein 2 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_048731523.1

TTTTTCctatctttttatttcaagttTAGCTAAAATTGTTTACAGAGTTTTGCAGAtaatcaaatttcaatgttttcttttgaGGATCTTAAAGATATTGCATAGGAGTAATTACTTTTAGGTTATGGCCATGCAAGGTCTATTTCCCAGAATTGAGCGAGATAAAACAAAGCTTCCAATTGGCTTTTGATTTTTTACACCAATCAGATTGCCTGAAAGAAAGTACGGTTCGATTCTTTAGATTTATCTGATCAACTGAAGTTATCAGAATTTATACTTAAAATTGAAGAATTGCTTCTAATGCGAGCGTCCTACATTATGGCACGAGAGACTACATTAAAGAATCGTCGTGTGAAGGTTCATAAGTCAAAAGACACGGCCGCTAAAGTTGATGTAGAGAGCAAGGACGAAAGGAgttgtgatgatgaagataaCTCAAGCACAGAAGAAGAAGAATGTGTAGATGATAAAATGAAGAATCAAAGTTCGACTCAGAAGAAAACGGGGGtaacaagaaaaaacaagCAGATCGATACTGAAAACTCAGCTCAACTAAGCAAACCTAAAGTATCTTTTAAACTGGGAAGTATCATATGTTATGCTTTGGTCTCGCTGGTTTTAGTTTTGTGTgcagtttttcttttaaatgtaATACCAGAGGAAATAAACCCATTCCCTACCAGTGATATCCAAGAGGAAGACTTTAAGTACATTCAAGTCTTTAAAGATGGATTAGAGATACTAAAAAGACAATTTCCCAATCAGACTAAAAGATTTTGGAGGATTCTTCGAACTCGGTGCTTGGCCCATCTCAAAGAAAAACACCCACGGCAACCATTGGTGATCTTGCTGGGTGCTCCACCCTCAGCGCACCCTGTAGCTAATTGTCTAGCATTGCGCCTTGCAAACATTCTAGACCCTGAGACAGAGCATATTGAGAATGTTGAGACAGTAAATGGTAAAGACCTCCAGAACATAGACGGGGACATTGCAAAGAAAAAACTAGATGAATCATTACATGGCACATTTCACAAGGGAAGACGTGCTGCAGTTGTTAAACACCTTGAACTATTGCCGCCCCCTTCAGAGAATTTGTTCTACGCATATTGCGACAACGATAATGCACGCTTCAAACATGCTGCCATATTATTCACAGTGCACTTGCAGATGGAACCCCATTCCTCGCTTAGGCCTGTGGAGGCTGAGGGCATGGTGGAAAAGTTTCTGTCTGACTTGGTGTGGAACAAGGAGCCATATGACAGAGATGCTGTCGCTGCACTCTTATCCCGTATTGCTGATACTGTTGCTTTGATCAGTAGAGAGGATGAAAAAGTTTATTCCCACTGTGgataatacttttttttatcacaaaaAGAGATGGTTTAAAGTGGACAACCATACATAGTTTCACTTAATTTCATGCATATGATGGCCTTGCTGGCATCTTGCCATGCTCAGGACAGCATTTTATGTAGCCTGCTAACTGACTCTCATTTGAGGTTATTCACAAGTATTTTCGCATTTAAAAAATGTGGATCTGGTGCTTCTCATCCATTGGCATGCCACAGGTTTCCCAatgttaaaaaacaaaacatttctgaATAACCATAAATGCATATTTTCTCATATTTTCTTCAGGATAAACAACAGCAAAAATTATCAGACATGCAGAGTCAGTCCTGGAGTCCAGGACCTGCAGGATCAACTATTGTGTATCTAAAGGAGAGGTCTCAGTTCCTTTTTCAgcttaaattttttttgctgtcAGACTGGTTATCCAATATTTGTTCATGTAAGTTCTACAACTCTTCTGGCCAAGGTTtgcatgtttattttttttttattcttgagACTTTTGCCTGCTCTAACTTTTTTTTGTGGTTTCTTAACCGAATATGAAATGGTTTGTTCCTAAATCAACCTATTATGACAATTTGTACTGTATTTGGTGATACAGTGATTGATATCCATGGCGTTAGCAGCAGGACACTAGCACATATATAAGAACAACCAATCTCTGACCTTTAAGAATAGCCTAACAGCACATTTTGGCTAGGGGTGGGGAAGGTAAGCAAAATCTGCTCTTGTTTAAAAATAGGTACCCATAAGGTACATGTGTGTGCTACAGTTTTTGACTCACAAAACCTCTAGGCTTAATAGCCCAATGCACACTTTGAAAGCTGTGGTAAGTCATTCGAGCATAATTAATCAGGTTCATAGCGAAATATTTACCTGTTTAAGCGAGAAAACCAGATTGATAAGTAAGGAAAGCCGCCATCTGGAATCATCAACAGAATGTGACATCGCGCCATAAACCTGAAATCGAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05609	LAP1_C	Lamina-associated polypeptide 1, AAA+ activator domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008662	Family	Torsin-1A-interacting protein 1/2	Interproscan
IPR038599	Homologous_superfamily	LAP1C-like, C-terminal domain superfamily	Interproscan
IPR046753	Domain	Torsin-1A-interacting protein 1/2, AAA+ activator domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18843	TORSIN-1A-INTERACTING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001671	Molecular Function	ATPase activator activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0061024	Biological Process	membrane organization	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23001	TOR1AIP; torsin-1A-interacting protein	-	Chaperones and folding catalysts	ko03110	deepkoala