Gene detail

Detailed information of XP_048587600.1 in Nematostella vectensis

Genomic Location: NC_064034.1:12588013...12596694
NR annotation: XP_048587600.1, lactadherin [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_048731643.1

CTCTAAGATAAATTAACACAAGCTTGCCAAACTTCAGACTACCAGTAATTCGCAAGTAAACTAGTAAAGAAGACTAACATCATGGGTATACAATTGCCAAAAATAATCCAGTTGCAAACACTGGCTATGCTTTCCGTCCTGCTTCTATCGCCGTCAGGGACGTCTGCCGACACCATTTTCCGCGATAATGAAATGTTCACTGAGGCCTTATTCAAGACATTGGTCGCTACTAAGCTCGATGTTCCCCCCAAACGCAAGATATCAAATTCTGATGCAATCGATTGTGTGCTTGAATGTCTAAGAGATAAGGCCTGTCAGTCGGTCAATCGTCGACATGGCGACTCATTGTGCGAGCTGATTGGTACAAACAAGTTTCAGGACCATTCTGCGCTCAAGACATCCACCGACTACGATCACTTTTATGTGACGtcaGAGTGTGATCGCCACCCGTGCCGCGATGGCGACTTCTGCCGGCCCCATTACGGTGAGGGATCATACCGGTGTGACTGCAGAGAAAACTACACAGGACCTGTGTGTGAGCATTGTACAGGACCAGCCCTTGGCATGGAGGACGGAAGAATCAAAGATTCGCAGCTGTCACAATCTTCATTTCAACAAGATCCGAAGTACGCTCGACTTAACAGGGTCGAGGTACCTCAAGGTGCTCAGCTAATGCAGTCGGACACGGATGGTGGGTGGTTCTTGGTGGACTTTCTAGTTACAAAGGTCATCAGTGCGTTTGCAATGCAGGGATATGGAAACGTTGGTGGCAATTCGCGCGTAACGTCCTTCATGATTTCCACGTCCCATGACAATGATACCTGGACATTTGTGAAGGCCATGGATAAGTCAGTAAATATTTTTCCTGGGAACACGGACAACGTTGGAATCGTGAAGACGACCTTTTCACCTCCTGTAGTAGGACGCTACTTCCGTATCACCACTAAGACTTGCGTATCATACTGTTCGTTCCGTCTGGAATTCTACGGCTGTGACATCTGCAAGTTAGGACATGCCCTTGGTATGGAGAACAGAAGGGTCAAAGCGGCGCAATTATCGCAGTCTACATACTATGACAACAATCCGGTGTATGGTGGCGACAATGCGCGCCTCAACAAAGTGGTCTGGCCTCAGGGAGCGCAGCTTCACATCGATAACGATGACGGTGGATGGTTCAAAGTGGATTTCCTGAGGGACAAGGTCATCATTGCCTTTGCGATGCAGGGATACGGTAACGCCCATGCAGTTGAACGCACGAAAAGGTTCTGGGTTTCCACTTCTCATGACGATGAAGTCTGGACATTTGTTAAGAACACTACTAGTGGAAGTCCCAAGctcTTCCCTGGGAATGTCCACAGCATCGCTACGGTCAACACAACCTTTACCCCTCCAGTGATCGGACGTTTTTTCAAAGTAACGACCAAGGAATGTTACCAGTGCTGCTCCTTCCGACTGGAGTTCTATGGCTGCGATGTGTGAATATTGTTGAACATGTGTCACACTAGAAGTTTATATAGCAATGTGAGTGAATATCGAATTTACTCGAATTAGCACCTCACTAACATGTATCATACTAGAAGCTTGTATGTAGTGGTAGTACAATTATTCTAATACAGTTGATAAGCTACGATATACTACTTAAAATGGAATTGAATCGGGTAAGCTATCTAAGGAGGCTCCAAATAATTTACTTTTGAGTATGAGCGTGCACAGCTTTCGTAAAATGTTAGAAGCCTGGTGCGTATACGCATGCCTATGTGTCAGTTTTTGAAATTATGTGGCACGGAACCAAATTTTCACTGCGTTAAAAATCAACGGCGAATTTTACTAAAATGCTATTTTCTCAAgagaaagtttaaaaaaaaaatcgaatacTCCCAtctcagggccgtagcagggggtgggggcactGGGGGCCCCCATATTTATAAAAATTAGGAAATGACcaagtaggggcgtggctgtgccccccaactattttcttaatgtttctgtagtgcccctccaatatttcgaggcctgctatggcactgCATCTAGTACTACTCTCTACAGTCGAACTCTGTAAGGTTATGTTCCTAGAAATGCGCATATCATATCAGATTATCATTTGACACTCTCCGGAAAGAATGTCAAGAGCTAGAGAGTAAGCTAGAGGGATAGTTGTCTTTTCTTAGTAAAAAGACAATCAGAGCCTAGTGCCTGGCTGCTCCTGCTCACTTTCTTGTTTGATCACTTATGCtttgaaagaaaacaattgTATAAGGATGAATGTGAGCAAATAAAGAATCTAGGAGAGAACA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00754	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050633	Family	Neuropilin/Multicopper Oxidase/Coagulation Factor	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR000421	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR008979	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46806	F5/8 TYPE C DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0038023	Molecular Function	signaling receptor activity	Interproscan