Gene detail

Detailed information of XP_048588131.1 in Nematostella vectensis

Genomic Location: NC_064042.1:14615382...14634621
NR annotation: XP_048588131.1, multidrug resistance-associated protein 1 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC116615039

ATGGCCTCGCCTGTGGTAAAGGGCAAGGAAATCCTCCTCTTAGCAGTTGAAAGCTATGATCCCCAGGATAGCGATGACTTGGGCATTTTGGAAGCTGCAGGAATGGCTCCTGAATTGGAAGCTCAACTGGCTGTAGAGAAGGGCTGCAAATTTGTATTGATTGGTGAAGTGTGCTGGTGGCTTCATGTTAAATGCCTGAAGACAGATGAACAAGGTTATATCCCTAGCATCCATGTTGTCCCTCTAAAAGACCATCTGCTACCGGCCGATGAGATTGACTTGGCTTGTGGAGGCAAGGTTTCGTATGGAATGCTGAATCTGGATGTCAATTTAAAATTCTTTCCATCTGTTCCTACAGATTATGGTGGCATTAAAAGGGAACCATGTCCAGAGAACAGTGCAAACATATTGTCTAAGGCTACATTTTGGTGGCTGAATTCGCTTATTTTTACTGGCTTCAAACGACCACTTGTGGACAAAGACATGTGGAGTCTTGCAAAGAAAAACAGGTCTGATTATATTATACCAAGAGTTGAAGCCAAGTGGAACAAGGAGGAAGAAAGACTCAGGAGAAAATATCCCCCAACATCAGGTTCTGGTGTCCACATGCATGAGTCTGCCAAGACGAGGAATGGCAAGCATGTAGAGGCAGACAAACTACCTAATGGGGATGTGGAAGAAGAAACTGTAGAGTTTGTCCCAAAAAAAGATGGGAAAATGGAAAAAAAGAAAACGCCATCTTTGACCAAAGTGATAGGGTTGATGTTCTGGAGAAGCTTCTTGTTGGCTGCATTCCTTAAGCTGACGCATGACTGTCTTTTGTTTGTTGAGCCATACTTACTCAACTTGTTGATCCAGTACACAGAGGAAGAAGATAGCCCTGATAATAGGTGGACTGGCTACATGTACGCTTTGGTGCTGTTTTTGAGTGGCATCACCCGTACCCTTGTCCTTCAGCAGTATTTCCACATCATGTTTAGACTCGGCATGAACATACGAACTTGTGTTGTAGGCATGGTCTATCCCAAGGCTCTTAGACTGAGTAACAAGTCCCGCAAGCAGTCCACAGCAGGAGAGATGGTAAACCTTCTCTCTGTGGACGCCCAGCGCCTGATGGACCTGATGTCCTACTTCAACACCGTCTGGTCCTCACCCCTCCAAATCGCCATTGCACTGTACTTCCTGTATAACACCATGGGCGTGTCTATCCTGGCTGGGATTGGAGTCATGCTGCTGCTAATCCCACTGAACATGTTCGTCACCAAGCTATCTCGTAAACTTCAGGTGAAAACTATGGAAGAGAAAGATAAGCGGATGAAGATAATCGGAGAAGTACTCAATGGGATCAAGGTTTTAAAGCTGTACGCCTGGGAATACTCCTTCATGAAGAAACTTGCAGGGATTCGTCGTGACGAGCTTCAGTACCACAAGTCGAGCATGTATCTTGCTGCAGGTTTTTCCTTCACCTATACCTGCGCTCCTTTTCTGGTTTCCCTGTCGACTTTTGCCGTTTATGTTTTAAGTGGCAACGAGCTGACCGCCCAGAAGGCCTTTGTCGCCATCTCTCTGTTCAACATTCTTCGCTTTCCTCTTATCATGTTCCCTAATATCATCATCCAGTTTATTCAGGCTCGAGTGTCTATTAAAAGAGTGCAACAATTCCTGCATCTGGAAGAGCTGAATCCGGAGTTTGTACAGCGGACAATGCCCTCTCAATATAACGCACAAGCCATTCACGTAGAGGACTGCTCCGTCACATGGGACAGCGGGGACCCGGATATACTGAGCGACATCAACCTGAACATCCCCGAGGGTTCCCTGGTTGCGGTGGTGGGACAGGTCGGGTGTGGCAAGTCCACCCTGCTCTCCGCGCTCCTCGGGGAGACGGAGAAAACGAAAGGGCAGGTTTATGTTAAGGGTTCTGTAGCGTATGTACCGCAGCAGGCCTGGATCCAGAATGCAACACTACGCGACAACATCCTATTCGGCCGAGAATACGACCCCGTGCGATACGGCAAGACTGTACGCGCTTGTGCACTGCAGACCGACTTTGACATACTTCCCTCCGGCGACAGTACAGAGATCGGTGAAAAGGGCATCAATCTTAGTGGTGGTCAGAAGCAGCGTGTTAATCTGGCCCGTGCTGTCTATTTCAATGCTGACGTGTACCTGCTAGATGACCCACTCAGCGCTGTCGACTCACATGTCGGCAAACACATCTTTGACAAGGTCATAGGACCGAGGGGGAAGCTCAGAAACAAGACTCGCGTCCTTGTGACACATGGGATCAGCTTTCTTCCGCAAGTGGACCAGATAGTGGTCCTGCAGAATGGACGGATTTCAGAGATCGGGACATACGCGGAGCTCCAGGCCAATCAGGGTGCGTTTGCCGAATTTCTAAAGATGTATGCAGCGGAACACAAGGACAAGGAAGAAGAGCCCATCATGATCGACTCTGCTATACCCACGCACATCGAGCAGGATGACCCTCTCGCGCTGGACCGTACAATCAGCATAGAGGAGATGGGAGGAAGCTGTGAGCAGCTGAACCTTGTGTTACCTGCTCGGCGTCGTGTTGAGTCGGAGATGTCTCACGATAGTGTACACGTGGAGGATACGCGCGCAGGCGAGGCCAAGGAGGCGGATAGGATGATCTCAGAAGAGACGTCAGAGATTGGAAGTGTGAAGTTCAAGGTGTTCCTGACCTACTTCCGTTACATCGGCGTCTTCATCGTCATCTTTGTCATGCTGCTCTTCATCCTCTCCGAGAGTTCTCTTATCCTATCACGCTTCTGGCTCGCTGATTGGAGCGTTACAAACGTCACGCAATCCTCTCAGCGAGACCGCTATCTTGGCGTTTACGGCGCGTTTGGCTTCGCACAAGCATTCTTCACCCTCCTCTCGTCATTCCTCCTCGCCTACGGCTCAATCAAGGTCTCCACTTCCCTGCATGAGCGGCTTCTGTTTAACATCCTTCGCTCACCGATGTCGTTCTTCGAGAGTACCCCTGTGGGCCGTATTGTCAATCGCTTCTCTAAGGACATATTTGTAATTGACGATACTCTACCTCGCTCATATCGGACTCTTATGACCTGTATCGTCAGCGTGCTTGGCTCAATGATTGCCATAAGCTTCGCCACGCCCCTGTTCCTGACGGTTGTGTTTCCACTAGCCATTGTCTATGTTGCAATACAACGCGTGTACGTTGCCTCCTCGCGGCAGCTGCGGCGCATTGAGTCCGTCAGTCGATCACCCATCTACAATAATTTTCTGGAGACGATCAACGGCACCAGCACCATCCGCGGCTACTCGCAGCAGATGCGATTCAACAGAACGAACTATTGCAAGGTGGACGATAGTCAGGTTGCGTACTATCCATGGGCCATCTCCAACAGATGGCTTGCAGTAAGGCTGGAATTCATCGGTAATCTGGTGATCCTCGCCGCTGCACTCTTCGCAGTCATCGCTCGAGGCAGGATCGATAGTGGCATGGTCGGCCTCTCGATAACCTACGCCTTCCAGATAACCCAGACGCTCAACTGGCTAGTGCGCATGTCTGGTGAGCTGGAGACAAACATTGTGGCAGTGGAACGCGTGAAGGAATACACAGAGGCCCCTACTGAGCCTGATTGGGAGATAGAGGACCATCGACCCCCGGACGGATGGCCCAATACTGGTAATATAAAGATTGACAGTTTGGACTTGCGCTACAGAGAGAGTCTACCCCTGGCACTAAAGGACATCTCCTGTGACATTCAGCCCGGAGAAAAGATCGGCATTGTCGGTCGTACCGGTGCTGGCAAGTCATCCCTTTCTCTAGCGCTGTTTCGAATGCTTGAGGCAGCTGGTGGAAAGATCGTGATCGACGGCGTCGATATCGCAAAGATCGGTCTGCACGACTTAAGATCCCGACTCACGATTATCCCTCAGGACCCCGTCCTGTTCTCCGGGACCCTGCGGTTCAACTTGGACCCATTTGATGCGTACTCGGATGAAGACCTGTGGGAGGTACTAGAGGTTAGCCATCTCAAGGCTTTCGCGTCAGGTCTGCCCGAGGGACTTCTGCACCCAATCGCAGAGGGAGGAGAAAATCTCAGTGTTGGACAGCGTCAGCTGGTGTGCCTGGCTCGCGCTCTGCTCAGGAAAAGTAAAGTCCTGGTGTTGGATGAGGCTACCGCTGCTGTGGATTTGGAGACGGATGAGCTGATTCAAAACACCATCAGAACAGAGTTCGCAGAGAGGACTGTCCTAACCATCGCCCACAGACTCAACACCATCATGGACTACACAAGGGTACTGGTGATGGATAGAGGCTGTACACGGGAGTTTGACAGTCCTCAGAACCTACTTGCTGCCAAGGGGATATTCTACGGGATGGCAAAAGATGCTGGCCTTGCGCCATAA

Transcript

rna-XM_048732174.1

ACAGGCTACCCACTTCTTCCTGGTCGATGTTGTCGCCATTACACAACGTCTTCTTTACGTATTGTTTTGATAACTCAGCAAAATCTTGCTGTACATTAATAGTTTTAGCGCTTACGGAGACGTAGAACCATCTAGTGTTGAAGGTTTATTAACAACTTCGGCGATAATTACTTTTTGATCCTTTGATACAGAGGGGGAACATACCAGCATCTTGCTCTAAAACTGTCTGTTTTGATTTCGACTGTTTGAAAATGTCCCCTATTCCTTAAGGATAACCGTGGTCATTAAGAATCTACGCATATCCATCACAACCATGGCCTCGCCTGTGGTAAAGGGCAAGGAAATCCTCCTCTTAGCAGTTGAAAGCTATGATCCCCAGGATAGCGATGACTTGGGCATTTTGGAAGCTGCAGGAATGGCTCCTGAATTGGAAGCTCAACTGGCTGTAGAGAAGGGCTGCAAATTTGTATTGATTGGTGAAGTGTGCTGGTGGCTTCATGTTAAATGCCTGAAGACAGATGAACAAGGTTATATCCCTAGCATCCATGTTGTCCCTCTAAAAGACCATCTGCTACCGGCCGAtgAGATTGACTTGGCTTGTGGAGGCAAGGTTTCGTATGGAATGCTGAATCTGGATGTCAATTTAAAATTCTTTCCATCTGTTCCTACAGATTATGGTGGCATTAAAAGGGAACCATGTCCAGAGAACAGTGCAAACATATTGTCTAAGGCTACATTTTGGTGGCTGAATTCGCTTATTTTTACTGGCTTCAAACGACCACTTGTGGACAAAGACATGTGGAGTCTTGCAAAGAAAAACAGGTCTGATTATATTATACCAAGAGTTGAAGCCAAGTGGAACAAGGAGGAAGAAAGACTCAGGAGAAAATATCCCCCAACATCAGGTTCTGGTGTCCACATGCATGAGTCTGCCAAGACGAGGAATGGCAAGCATGTAGAGGCAGACAAACTACCTAATGGGGATGTGGAAGAAGAAACTGTAGAGTTTGTCCCAAAAAAAGATgggaaaatggaaaaaaagaaaacgccATCTTTGACCAAAGTGATAGGGTTGATGTTCTGGAGAAGCTTCTTGTTGGCTGCATTCCTTAAGCTGACGCATGACTGTCTTTTGTTTGTTGAGCCATACTTACTCAACTTGTTGATCCAGTACACAGAGGAAGAAGATAGCCCTGATAATAGGTGGACTGGCTACATGTACGCTTTGGTGCTGTTTTTGAGTGGCATCACCCGTACCCTTGTCCTTCAGCAGTATTTCCACATCATGTTTAGACTCGGCATGAACATACGAACTTGTGTTGTAGGCATGGTCTATCCCAAGGCTCTTAGACTGAGTAACAAGTCCCGCAAGCAGTCCACAGCAGGAGAGATGGTAAACCTTCTCTCTGTGGACGCCCAGCGCCTGATGGACCTGATGTCCTACTTCAACACCGTCTGGTCCTCACCCCTCCAAATCGCCATTGCACTGTACTTCCTGTATAACACCATGGGCGTGTCTATCCTGGCTGGGATTGGAGTCATGCTGCTGCTAATCCCACTGAACATGTTCGTCACCAAGCTATCTCGTAAACTTCAGGTGAAAACTATGGAAGAGAAAGATAAGCGGATGAAGATAATCGGAGAAGTACTCAATGGGATCAAGGTTTTAAAGCTGTACGCCTGGGAATACTCCTTCATGAAGAAACTTGCAGGGATTCGTCGTGACGAGCTTCAGTACCACAAGTCGAGCATGTATCTTGCTGCAGGTTTTTCCTTCACCTATACCTGCGCTCCTTTTCTGGTTTCCCTGTCGACTTTTGCCGTTTATGTTTTAAGTGGCAACGAGCTGACCGCCCAGAAGGCCTTTGTCGCCATCTCTCTGTTCAACATTCTTCGCTTTCCTCTTATCATGTTCCCTAATATCATCATCCAGTTTATTCAGGCTCGAGTGTCTATTAAAAGAGTGCAACAATTCCTGCATCTGGAAGAGCTGAATCCGGAGTTTGTACAGCGGACAATGCCCTCTCAATATAACGCACAAGCCATTCACGTAGAGGACTGCTCCGTCACATGGGACAGCGGGGACCCGGATATACTGAGCGACATCAACCTGAACATCCCCGAGGGTTCCCTGGTTGCGGTGGTGGGACAGGTCGGGTGTGGCAAGTCCACCCTGCTCTCCGCGCTCCTCGGGGAGACGGAGAAAACGAAAGGGCAGGTTTATGTTAAGGGTTCTGTAGCGTATGTACCGCAGCAGGCCTGGATCCAGAATGCAACACTACGCGACAACATCCTATTCGGCCGAGAATACGACCCCGTGCGATACGGCAAGACTGTACGCGCTTGTGCACTGCAGACCGACTTTGACATACTTCCCTCCGGCGACAGTACAGAGATCGGTGAAAAGGGCATCAATCTTAGTGGTGGTCAGAAGCAGCGTGTTAATCTGGCCCGTGCTGTCTATTTCAATGCTGACGTGTACCTGCTAGATGACCCACTCAGCGCTGTCGACTCACATGTCGGCAAACACATCTTTGACAAGGTCATAGGACCGAGGGGGAAGCTCAGAAACAAGACTCGCGTCCTTGTGACACATGGGATCAGCTTTCTTCCGCAAGTGGACCAGATAGTGGTCCTGCAGAATGGACGGATTTCAGAGATCGGGACATACGCGGAGCTCCAGGCCAATCAGGGTGCGTTTGCCGAATTTCTAAAGATGTATGCAGCGGAACACAAGGACAAGGAAGAAGAGCCCATCATGATCGACTCTGCTATACCCACGCACATCGAGCAGGATGACCCTCTCGCGCTGGACCGTACAATCAGCATAGAGGAGATGGGAGGAAGCTGTGAGCAGCTGAACCTTGTGTTACCTGCTCGGCGTCGTGTTGAGTCGGAGATGTCTCACGATAGTGTACACGTGGAGGATACGCGCGCAGGCGAGGCCAAGGAGGCGGATAGGATGATCTCAGAAGAGACGTCAGAGATTGGAAGTGTGAAGTTCAAGGTGTTCCTGACCTACTTCCGTTACATCGGCGTCTTCATCGTCATCTTTGTCATGCTGCTCTTCATCCTCTCCGAGAGTTCTCTTATCCTATCACGCTTCTGGCTCGCTGATTGGAGCGTTACAAACGTCACGCAATCCTCTCAGCGAGACCGCTATCTTGGCGTTTACGGCGCGTTTGGCTTCGCACAAGCATTCTTCACCCTCCTCTCGTCATTCCTCCTCGCCTACGGCTCAATCAAGGTCTCCACTTCCCTGCATGAGCGGCTTCTGTTTAACATCCTTCGCTCACCGATGTCGTTCTTCGAGAGTACCCCTGTGGGCCGTATTGTCAATCGCTTCTCTAAGGACATATTTGTAATTGACGATACTCTACCTCGCTCATATCGGACTCTTATGACCTGTATCGTCAGCGTGCTTGGCTCAATGATTGCCATAAGCTTCGCCACGCCCCTGTTCCTGACGGTTGTGTTTCCACTAGCCATTGTCTATGTTGCAATACAACGCGTGTACGTTGCCTCCTCGCGGCAGCTGCGGCGCATTGAGTCCGTCAGTCGATCACCCATCTACAATAATTTTCTGGAGACGATCAACGGCACCAGCACCATCCGCGGCTACTCGCAGCAGATGCGATTCAACAGAACGAACTATTGCAAGGTGGACGATAGTCAGGTTGCGTACTATCCATGGGCCATCTCCAACAGATGGCTTGCAGTAAGGCTGGAATTCATCGGTAATCTGGTGATCCTCGCCGCTGCACTCTTCGCAGTCATCGCTCGAGGCAGGATCGATAGTGGCATGGTCGGCCTCTCGATAACCTACGCCTTCCAGATAACCCAGACGCTCAACTGGCTAGTGCGCATGTCTGGTGAGCTGGAGACAAACATTGTGGCAGTGGAACGCGTGAAGGAATACACAGAGGCCCCTACTGAGCCTGATTGGGAGATAGAGGACCATCGACCCCCGGACGGATGGCCCAATACTGGTAATATAAAGATTGACAGTTTGGACTTGCGCTACAGAGAGAGTCTACCCCTGGCACTAAAGGACATCTCCTGTGACATTCAGCCCGGAGAAAAGATCGGCATTGTCGGTCGTACCGGTGCTGGCAAGTCATCCCTTTCTCTAGCGCTGTTTCGAATGCTTGAGGCAGCTGGTGGAAAGATCGTGATCGACGGCGTCGATATCGCAAAGATCGGTCTGCACGACTTAAGATCCCGACTCACGATTATCCCTCAGGACCCCGTCCTGTTCTCCGGGACCCTGCGGTTCAACTTGGACCCATTTGATGCGTACTCGGATGAAGACCTGTGGGAGGTACTAGAGGTTAGCCATCTCAAGGCTTTCGCGTCAGGTCTGCCCGAGGGACTTCTGCACCCAATCGCAGAGGGAGGAGAAAATCTCAGTGTTGGACAGCGTCAGCTGGTGTGCCTGGCTCGCGCTCTGCTCAGGAAAAGTAAAGTCCTGGTGTTGGATGAGGCTACCGCTGCTGTGGATTTGGAGACGGATGAGCTGATTCAAAACACCATCAGAACAGAGTTCGCAGAGAGGACTGTCCTAACCATCGCCCACAGACTCAACACCATCATGGACTACACAAGGGTACTGGTGATGGATAGAGGCTGTACACGGGAGTTTGACAGTCCTCAGAACCTACTTGCTGCCAAGGGGATATTCTACGGGATGGCAAAAGATGCTGGCCTTGCGCCATAATATGGTGCTACATTGGAATCTCATGAATACGGACAGTGGAACCCCGTTATTATGGATACTATAGGCAACCGTAAAAGTTTCCTCGTACAGTGGAACCCCATTAATACGGACACCATAGCGAACCGTGAAAGTTACCCCATTAATACGGACACCATAGCGAACCGTGAAAGTTTCCCCGTACAGTGGAACCCCCTTAATACGGACACCATAGGGAACCGTGAAAGTTTCCCCGTACAGTGGAACCCCATTAATACGGACACCATAGCGAACCATGAAAGTTACCCCATTAATACGGACACCATAGCGAACCGTAAAAGTTTCCTCGTACAGTGGAACCCCATTAATACAGACACCATAGGGAACCGTGAAAGTTTCCCCGTACAGTGGAACCCCCTTAATACGGACACCATAGGGAACCGTGAAAGTTTCCCCGTACAGTGGAACCCCATTTATACGGACACCATAGGGAACCGTGAAAGTTTCCCCGTACAGTGGAACCCCCTTAAAACGGACACCATAGGGAACCGTGAAAGTTTCCCCGTACAGTGGAACCCCATTTATACGGACACCATAGGGAACCGTGAAAGTTACCCCGTACAGTGGAACCCCATTAATACGGACACCATAGGGAACCGTGAAAGTTTCCCCGTACAGTGGAACCCCATTTATACGGACACCATAGGGTACCGTGAATGTTTCCCCGTACAGTGGAACCCCCTTAAAACGGACACCATAGGGAACCGTGAAAGTTTCCCCGTACAGTGGAACCCCATTAATACGGACACCATAGGGAACCGTGAAAGTTTCCCCGTACAGTGGAACCCCATTTATACGGACACCATAGGGTACCGTGAATGTTTCCCCGTACAGTGGAACCCCCTTAATACGGACACCATAGGGAACCGTGAAAGTTTCCCCGTACAGTGGAACCCCCTTAATATGGACACCATAGGGAACCGTGAAAGTTTCCCCGTACAGTGAAACCCCATTTATACGGACACCATAGCGAACCGTGAAAGTTACCCCATTAATACGGACACCTTAGCGAACCGTGAAAGTTTCCCCGTACAGTGGAACCCCATTAATACGGACACCATAGGGAACCGTGAAAGTTTCCCCGTACAGTGGAACCCCCTTAATACGGACACCATAGGATGAAAACCGTAATGCGGTTctcatacaaaaaaaaatatatttatcttaatatatattttttggttTTATAGATATCAGTATTGTAAAGTTTGGTTCGGTAAAAAATTAACATAATGCGGTATGATATATACAAGGATATACTTTATAATATTACTATAAAGTTAAGATCTTATATTTATCATAAATAAAGATTGACTGCCTAATAAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5F364	Multidrug resistance-associated protein 1 OS=Gallus gallus OX=9031 GN=ABCC1 PE=2 SV=1
O35379	Multidrug resistance-associated protein 1 OS=Mus musculus OX=10090 GN=Abcc1 PE=1 SV=1
Q6UR05	Multidrug resistance-associated protein 1 OS=Canis lupus familiaris OX=9615 GN=ABCC1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000027 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan
PF00664 all species →	ABC_membrane	ABC transporter transmembrane region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005292 all species →	Family	Multi drug resistance-associated protein	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR017871 all species →	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036640 all species →	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR011527 all species →	Domain	ABC transporter type 1, transmembrane domain	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR050173 all species →	Family	ATP-binding cassette transporter C	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24223 all species →	ATP-BINDING CASSETTE SUB-FAMILY C	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0022857 all species →	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0140359 all species →	Molecular Function	ABC-type transporter activity	Interproscan
GO:0042626 all species →	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_048588131.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_048588131.1 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

43TPM > 0

16Conditions

9.4Max TPM

6.0Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	6.90	7.76
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	5.37	7.62
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	4.90	6.17
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	6.69	7.91
whole 6 week old aboral regenerate · regenerate uncut	3	3	4.92	5.56
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	4.35	7.93
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	4.28	7.44
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	6.96	7.72
whole 6 week old aboral regenerate · regenerate 24hpa	3	3	7.78	9.22
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	6.93	8.65
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	7.37	8.30
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	4.57	7.67
whole 6 week old aboral regenerate · regenerate 60hpa	3	3	6.61	7.04
whole 6 week old aboral regenerate · regenerate 48hpa	3	2	4.43	8.42
whole 6 week old aboral regenerate · regenerate 8hpa	3	3	8.23	8.74
whole 6 week old aboral regenerate · regenerate 12hpa	3	2	5.54	9.40

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	7.76
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	7.08
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	5.84
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	7.62
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	4.38
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	4.11
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	6.17
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	4.60
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	3.92
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	7.91
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	6.84
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	5.32
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	5.56
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	5.17
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	4.04
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	7.93
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	5.13
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	7.44
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	5.39
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	7.72
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	7.45
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	5.72
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	9.22
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	7.68
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	6.44
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	8.65
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	7.06
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	5.06
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	8.30
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	7.42
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	6.39
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	7.67
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	6.02
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	7.04
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	6.93
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	5.86
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	8.42
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	4.86
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	8.74
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	8.55
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	7.39
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	9.40
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	7.21
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.