Gene detail

Detailed information of XP_048588406.1 in Nematostella vectensis

Genomic Location: NC_064042.1:9023497...9037069
NR annotation: XP_048588406.1, multidrug resistance-associated protein 1 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_048732449.1

TGTTATCATGTTTGATAGGCCATTAATCTAAACTTGAGCGGTTTATAAACGCGCGCGCTATTACCCATGGTGCAACTGAGgcaaacaagatggcggttCTCACGGGACTTGAACATGACGCGGGCTGCGATAGAAACCTTCACGTAACTTGTTGATATTATAAGCCCTCCATTGAACCCTGGCGACTCTATATCCTAGCGAGATTGCCCGCGGCCCTCTGCCGTATAATTGATGCATTTTTGGTGATGTTTTGACGCTTATGCTAATCATCTTTGACCATCAACTAAAGAACTTGCGGATTTCGAGAATATTTTTACACCTTCGGTGAGTGAGATGCTCTGTTTGGATAACCCAAGATGATGACAGAGGAAGATGAAAGCACTTTACTGATAATAGCCCTATGTGATTATGATCCTACCGGAAATAGCGGCCCAGCTATTGATGAGGCTGTAAGCAGTGCCCCGGGGAAAGCATTCCAGCTGCTGTTTACTCGAGGCCAATTGTTTAATGTTGTTGGCGGAAAGGCACTGGGCTGGTGGTTGTTTGTGCGAGGTGTTAATGACGAGGGGTATGTGCCTAGTACTTGTTTTGTGCCACTACAGCGGGAAATGACCAAACAAGAACACCAGGATTTCATGGACAGTGGTATTCTCCCATCACATATTATCAAGACAGACATTGACCTTAGATTCTTTCCTGATGCTCCACAAGACAGGAACATTATGGATAGGGACCATTGCCCCAGGAAGACAGCAAATATTCTATCaagattgttattttggtgGTTAAATAGGCTTATTCTTACTGGTTTCAAACGACCGCTAGAAAACACAGATCTTTGGCAGCTTGAAGAAGCTAACAGATCATCTAGAATAGTGCCAAGGCTCCAACAAGAATGGAAGAAAGAACAAGATAAACTCAAAAGATCCAAAAAGCCCCAGGTTCATGTGGAGTCAGAAGCTATTCATCTGAAGCTTGAGCCAGAGGAAGTGTCTTTCTCAACAACTACAAAGGCTGCATTCTCTCAGCCTTCACTCAGAAAGGCCTTGTCTAGAGTATTTGGAGGGTATTTTGCTGTAAGCGTTGTTCTCAAGCTGGGAAGTGATTCCTTGCTGTTTGTGCAACCGCAGCTATTAAGTTTGTTGATACATTTCATCGAGACTCCTAATGAAGAAGTGTGGCGTGGCTATGTGTACGTCGTGTGCATGGTCATCACTGCCATACTCCAGTACATACTCGCCCAGCATTCTATACACCAGTCCTTCATGACGGGCATGAAGACAGGCACCGCCCTCATGGGGATAGTATATACCAAGGCTATGTCCCTCAGTAGCTCATCAAGAAAGCAGTCTACAGTGGGTGAGATTGTGAACTTAATGGCTATCGACTCACAACGAGTCGTCACCCTCATAAACACCATAAACCAGGTGTGGTCTGCCCCCATGCAAATAGTCACTGCTATATACTTCCTATACGTGCTGATGGGGGCCTCCATACTCGTGGGCGTGGCAGTACTGCTACTGTTGGTTCCGCTAAATATCCTGGTGACACGCATCTCTCGCAGGCTACAGGTGAAGCAACTCAAGTTTAAAGATGATCGTGTCAAACTTATCAGTGAAGTTCTTAGTGGAATTAAGGTCCTTAAGTTATACGCCTGGGAAGAGGCATTCATGGAGAGGATCATGGGAATCCGTAAATCCGAGATCCATCATCTCACAAACAGTCTGTACTTGAACGCTTCGGTGTCATTCACATTCATATGTGCTCCTTTCTTGGTATCTCTGGCGACGTTCACTGTCTACGTTCTGACTGGAAACGAGTTAACAGCAACTAAAGCATTCGTGGCCATCTCGCTCTTTAATATTTTACGCTTCCCGCTAGCTGTCTTTCCAAGAAACATCGTCAACCTTATTCAGGCTCAAGTTTCGTTTTCGCGATTAACAGAGTTTCTAAACATGGAGGAAGTAGATCCTGAAAACGTGATACACGCAATGCCTGCACATGTGAGTTCTCTCGCCGTTCACGTTCAGCATGGCTCTTTCTCCTGGCAGAGAGATGAGCCTGCTGTACTCGACAATataaacctggatgtccccGCGGGCTCGCTTATTGGTCTAAGTCTTGTCACTCTCAGTataaacctggatgtccccGCGGGCTtgcttattgatctaagtcttgtcacTCTCAtataa

Protein

Uniprot

Uniprot term	Description
Q5F364	Multidrug resistance-associated protein 1 OS=Gallus gallus OX=9031 GN=ABCC1 PE=2 SV=1
Q6UR05	Multidrug resistance-associated protein 1 OS=Canis lupus familiaris OX=9615 GN=ABCC1 PE=1 SV=1
O35379	Multidrug resistance-associated protein 1 OS=Mus musculus OX=10090 GN=Abcc1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07653	SH3_2	Variant SH3 domain	Domain	Interproscan
PF00664	ABC_membrane	ABC transporter transmembrane region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050173	Family	ATP-binding cassette transporter C	Interproscan
IPR036640	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR001452	Domain	SH3 domain	Interproscan
IPR011527	Domain	ABC transporter type 1, transmembrane domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24223	ATP-BINDING CASSETTE SUB-FAMILY C	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0042626	Molecular Function	ATPase-coupled transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0140359	Molecular Function	ABC-type transporter activity	Interproscan