Detailed information of XP_048588833.1 in Nematostella vectensis

Genomic Location: NC_064042.1:1897310...1915760
NR annotation: XP_048588833.1, uncharacterized protein LOC5509931 isoform X2 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q28858Versican core protein (Fragments) OS=Macaca nemestrina OX=9545 GN=VCAN PE=2 SV=1
P13611Versican core protein OS=Homo sapiens OX=9606 GN=VCAN PE=1 SV=3
Q62059Versican core protein OS=Mus musculus OX=10090 GN=Vcan PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00193XlinkExtracellular link domainDomainInterproscan
PF00059Lectin_CLectin C-type domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000538DomainLink domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR043210FamilyCD44 antigen-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10225HYALURONAN RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005540Molecular Functionhyaluronic acid bindingInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01363CTSB; cathepsin BEC:3.4.22.1
Glycosaminoglycan binding proteinsko00536deepkoala

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