Gene detail

Detailed information of XP_048589188.1 in Nematostella vectensis

Genomic Location: NC_064043.1:7138635...7146298
NR annotation: XP_048589187.1, hsc70-interacting protein isoform X2 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_048733231.1

ATGCGTGAATACCATTTCATTACACGAAAATCGAACTCGGGGAAGTGTGTACAAGTGTGCTTGACTTTTGAGTTTGTTGCAGGATTTACTCCTGAAATAACTCAACATGACGAGTATAAAGTTCACTAATGAACAGCTAAAGGGGTTGTATGAATTTGTGATGCTGTGTAAAATGCACCCCGAAATAATTCACGATAAAAAGTTGGCGTTCTTTCGCGAGTGGCTTGAAAGCCTGGGAGCCAAATTGCCAGATCCCCCAATGCCTAGCCAGCCAGAGGCCCCACCACAAGAAGAAAACATGGATTCCAAACCTGAACCCAATAAAGAGGCTCCATCACCTGAACCAGAACCAGAGAGTGAAGAGAGTGATGTTGACATTGATCAGACGGGTGTCATTGAGCCAGATGTTGATGAGCCTGTGCCAATGGGAGATGATTCTATTGAGGTTACAGAAGAAATGATGGATGAGGCAAATGATCTTAGGATGAAAGCAATGGAAGCCATGAATGAAGgtaACCTGGAAGAGGCTATTAAGCTTTTTACTGATGCGATTATGAAAAACCCCCATTCAGCACCATTGTTTGCTAAACGGGCAAGttgctTTATCCGAATGAAGAAGCCAAATGCTGCTATCAGAGACTGTGACAAGGCGGCTCAGATTAACCCAGATTCGGCTCAGATTTACAAGTGGAGAGGACGTGCCCATGAGTTTCTTGGTCACTGGGAGAAAGCCGACAAGGACCTTGCGCAGGCCCTCAAACTTGACTTTGATGAACAAGTCAACGAGTGGTTCAAGGATGTTCATCCAAAGGCTCTAAAGATTGCTGAGCATAATAGGAAATATCAGAGAAAGCGGGAAGAAAAAGAACTCagggaaaaaaaagagagaataAGGAaagcacaggaagcccaagaGAAAGCACGGAAGGaggaaaaggaaaggaaaagaaaacaagagaAAGCACATACAGGAGGATTCCCTGGAGGAATGCCCGGAGGAATGCCTGGGGGAATGCCTGGGGGATTCCCTGGTGCTGGGGGAATGCCTGGGGGATTCCCTGGTGCTGGAGGAATGCCTGGGGGATTCCCTGGTGCTGGGGGAATGCCAGGTGGTCCAGGTGGTATTGATATCAACACGATTCTCAATGACCCTGAAGTGATGCAAGCTTTCCAGGATCCAGAAGTCATGGCTGCTTTCCaagatgtcaatcaaaaccCTGCCAATATGGCCAAGTACCAGAACAACCCCAAGATCAAGAGAATTATTGAGAAACTTGCCACCAAGTTCGGAGAGCCCGGACAAGGATTCCCTCCCGGTGCCCCCCCTGGCAGTGGTGGATTTCCTCCAGGTTCAGGTTTTCCACCAGGTGGGTTCCAGCCCCCGCCTAGTGGGGGAGGTTTTGCTGGAAACATGCCTGATATCGACTAAATAGACTCGGACCAATGTACTTCTTTTTTGGTGACTGTCATGTACACGATGTATCGAAGCACTCTTCACTTGTTTTACAGCGTAGGCAAGTACGTGGTAATGAGAaaatagggaccttaagcaatgTCAACGGCAACGCGGACGCCAACGGCAGAAAACCATCatatttgattcagaattcaatagcagcacttggaaatgcgttctgtctgatacatttcagccgttttccgtAAAACCACGACGTAAAAACTCGAAgtttcacggtcaattgaggacACGGACGTTTGCATCGTGAACTCCACTAACTGCGTTCGCTGCTGTATAAATAAatgtccttagtttacattttactgtctctgactataatgttttgcttattccgTTGCAATTAGATTATTATTGATCACTACGCGcgaaaacatctttttcgatcgcgttgtcctagccgtcgtcgtcgttTTTGTTTAAGGTCCCTTACTGCATCCAATACCCTCTCGTTAAATCTGGTGTTACACTCAGTTTATTAAGCAAGTTATACATGTCGCTACGTTGCACGTGGTTTCATAGACCGTTAAGCTGTTAAGCAGTTAGGTTTTGTATCTTTTTATGCGGTATTACTGTAAAACACTACTGGATTGATGTAATTGCAGTGCATCATTACTAGCAATAAAGACCTTTTTGAGTCGAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5RF31	Hsc70-interacting protein OS=Pongo abelii OX=9601 GN=ST13 PE=2 SV=1
P50502	Hsc70-interacting protein OS=Homo sapiens OX=9606 GN=ST13 PE=1 SV=2
Q8NFI4	Putative protein FAM10A5 OS=Homo sapiens OX=9606 GN=ST13P5 PE=5 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005981 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18253 all species →	HipN	Hsp70-interacting protein N N-terminal domain	Domain	Interproscan
PF17830 all species →	STI1-HOP_DP	STI1/HOP, DP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR034649 all species →	Domain	Hsp70-interacting protein, N-terminal	Interproscan
IPR006636 all species →	Domain	Heat shock chaperonin-binding	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR041243 all species →	Domain	STI1/HOP, DP domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45883 all species →	HSC70-INTERACTING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0046983 all species →	Molecular Function	protein dimerization activity	Interproscan
GO:0030544 all species →	Molecular Function	Hsp70 protein binding	Interproscan
GO:0051085 all species →	Biological Process	chaperone cofactor-dependent protein refolding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09560	ST13; suppressor of tumorigenicity protein 13	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.