Gene detail

Detailed information of XP_048589331.1 in Nematostella vectensis

Genomic Location: NC_064043.1:4232762...4246261
NR annotation: XP_048589331.1, H(+)/Cl(-) exchange transporter 4 [Nematostella vectensis]
Species Nematostella vectensis · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC5504521

ATGGATCGGTCGAGACTTCCATCGGAGCTTTCGACCGACGAATCAACCATTCAGCAAGACCACTTTCAGTATGAAGACGACGAAGAGAGAATTATAAGAAATTCCCCAAACTTGAGGTTTACTAAAGACTATGCCGAATTCTTTATGGAAGAGCCCGAAGCCGCCGCTCTCGCTCAATACGATGACTTCCATACGATAGACTGGGTGAGAGATCGTCAGAGAGATAGAGTACGATTTCGCCGAATGAGGCGCATGAAGCGGGGCAGCATCTGGGAAAGAATCAAACAAGCTAACGACGCATGGGGTGGCTGGCTGGTTGTGCTTCTAGTCGGACTATCAGCTGGACTGTCAGCAGGAGTTATTGATGTCGGGGCAAGCTGGATGACCGATTTGAAACGCGGAATTTGTCCTCAGAATTTATGGTTTAACGAAGAAAGTTGTTGCTGGAGCGACGATAATACGTTTGCTGATGTAGGTTGTCAGCAATGGAAAACATGGGGTGAAATTTTTATTGGGGAGAGCGAGGGAGTCGGGGTATATTTGATGAATTATATCATCTATGTGCTGACCGCACTTGGGTTTGCTGGGTTGGCTGTGGTGTTGGTGAGATGGATAGCTCCATACGCGTGCGGAAGTGGTATACCAGAGATTAAGACTATTCTGAGTGGGTTTATCATACATGGATATCTGGGTAAGCTGACCCTCATTGTCAAGTCCATGTCGATGATGCTTGCAGTGGCTGCTGGTCTCAGCCTCGGGAAGGAAGGTCCACTTGTCCATGTTGCTTGTTGTTGTGGTAACTTCTTCTCCTATGTCTTTGCCAAGTATCACAGGAATGAAGCAAAAAAAAGAGAGGTTTTATCAGCTGCTGCTGCGGCGGGCGTGTCTGTCGCATTTGGCGCACCAATTGGAGGTGTCCTCTTTAGCTTGGAAGAGGTGAGCTATTATTTTCCCATGAAGACATTGTGGCGTGCGTTTTTCTGTGCGATGATAGCAGCGTTTACCCTAAAGTACATGAATCCTTACGGCACTGGTAATCTGGTTATGTTCTATGTCGAGTATGACACTCCTTGGAAACTATTTGAGCTACTGCCGTTTGTCCTTCTTGGTGCGCTTGGGGGCCTCATAGGTGCAGTTTTCATAAAAGCTAACCTGTGGTGGTGTAAAAAGAGAAAGAATTCACGATTTGGAAACTTTTCTATTGCTGAGGTTTTACTGGTCACCCTGATAACTGCTCTGATAGCTTTTCCTAATCCGTACACCAGGCAGAGTAGTAGTGTCCTTATTCAGCACCTCTTCAGGCAGTGTGGTCCAGACGATGGCTCTCCTCTTTGTGACTATATTGATAATAACAAGACAATAAATGTGAATAACCCGCACTACCCTGGTGCAGAGGCGGGACCTGGGGTTCTGAAAGCCGTATGGCAGTTATTACTGGCAGCTCTTTTCAAGCTCATCATCACTGTGTTTACGTTTGGGATCAAGGTTCCAGCTGGGCTGTTTATTCCCAGTATGGCTATTGGAGCATGCATTGGTCGCATTATTGGCATTGGCGTTGAGCAGCTTGCCGTCTCCAACCCAGAATGGTTGGTGTTTTCATCCTCATGCGGCAATTCTATCAGTAACTGCGTCACGCCTGGTCTCTATGCAATGGTGGGGGCAGCTGCTGTGTTGGGCGGAGTCACCAAAATGACAGTTTCTCTGGTTGTGATCATGTTTGAACTAACTGGTGGATTGACGTACATTGTACCACTCATGGTGGCTATTATGACCAGTAAATGGGTAGGCGACGCCTTCATCAAAGAGGGAATATATGATGGCCACATACATCTAAATGGCTATCCATTCCTTGATAACAAAGAGGAGTTCACCCATACGACCCAAGCATCAGATGTAATGAGGCCACGTAAGCATGATCCAGCTTTGTCATGCATAACTCAAGATGAATTTACAGTTGGTGATCTAGAGCAATTACTTGATGAAACTGAGTTCAAAGGATTTCCAGTAATAGTGGACAAAGAATCTCAGCGTCTTGTTGGATTTGTGCTACGTAGAGACCTTAAAATAGCTTTGAGGCATGCACGCATAAGGAATGAGGAGATTGTGAGCGCATCCAAAGTCTACTTTACAGAACAGTCAACCCGGTATGCTACCCCCGGTCAAGCTGCCCCTCTGACCCTTCGCCACATTCTAGACATGAGCCCAATTCAAATCACTGATGCTACTCCCATGGAGACGGTTGTGGAGCTGTTTAGAAGGGTTGGATTGAGGCAGACACTTGTAACACATAACGGTCGCCTTTTAGGTATCATTACGAAAAAAGATGTACTGCGTCACATAGCGACATTAGCCAATCAGGATCCAGAATCAATACTATTTTCATGA

Transcript

rna-XM_048733374.1

TTTGTAAGCCCTTTTACCGTACAACTAAAAGCGATTTGTAGCAATATCTATCATCCTCATTTAGCTTTAAATGATGCAGTGAGCAAACCTcaacaaaaagaagaaataattATCGAAGAATGGAAAACATAGCTAGAGAGGGCAAAGGCGAATGAGGGCTGCTTGTAGCAGGTACAGGTGTACTTGAAAGATGCGATATGCACTTCTTTCAGTACTTCTATAGCAATCAGACATGAAGTACATATCTTTTGTGTGATTGTGATTCCTCCGACCTTCGTGTCAAAATGGATCGGTCGAGACTTCCATCGGAGCTTTCGACCGACGAATCAACCATTCAGCAAGACCACTTTCAGTATGAAgacgacgaagagagaattaTAAGAAATTCCCCAAACTTGAGGTTTACTAAAGACTATGCCGAATTCTTTATGGAAGAGCCCGAAGCCGCCGCTCTCGCTCAATACGATGACTTCCATACGATAGACTGGGTGAGAGATCGTCAGAGAGATAGAGTACGATTTCGCCGAATGAGGCGCATGAAGCGGGGCAGCATCTGGGAAAGAATCAAACAAGCTAACGACGCATGGGGTGGCTGGCTGGTTGTGCTTCTAGTCGGACTATCAGCTGGACTGTCAGCAGGAGTTATTGATGTCGGGGCAAGCTGGATGACCGATTTGAAACGCGGAATTTGTCCTCAGAATTTATGGTTTAACGAAGAAAGTTGTTGCTGGAGCGACGATAATACGTTTGCTGATGTAGGTTGTCAGCAATGGAAAACATGGGGTGAAATTTTTATTGGGGAGAGCGAGGGAGTCGGGGTATATTTGATGAATTATATCATCTATGTGCTGACCGCACTTGGGTTTGCTGGGTTGGCTGTGGTGTTGGTGAGATGGATAGCTCCATACGCGTGCGGAAGTGGTATACCAGAGATTAAGACTATTCTGAGTGGGTTTATCATACATGGATATCTGGGTAAGCTGACCCTCATTGTCAAGTCCATGTCGATGATGCTTGCAGTGGCTGCTGGTCTCAGCCTCGGGAAGGAAGGTCCACTTGTCCATGTTGCTTGTTGTTGTGGTAACTTCTTCTCCTATGTCTTTGCCAAGTATCACAGGAATGAAGCAAAAAAAAGAGAGGTTTTATCAGCTGCTGCTGCGGCGGGCGTGTCTGTCGCATTTGGCGCACCAATTGGAGGTGTCCTCTTTAGCTTGGAAGAGGTGAGCTATTATTTTCCCATGAAGACATTGTGGCGTGCGTTTTTCTGTGCGATGATAGCAGCGTTTACCCTAAAGTACATGAATCCTTACGGCACTGGTAATCTGGTTATGTTCTATGTCGAGTATGACACTCCTTGGAAACTATTTGAGCTACTGCCGTTTGTCCTTCTTGGTGCGCTTGGGGGCCTCATAGGTGCAGTTTTCATAAAAGCTAACCTGTGGTGGTGTAAAAAGAGAAAGAATTCACGATTTGGAAACTTTTCTATTGCTGAGGTTTTACTGGTCACCCTGATAACTGCTCTGATAGCTTTTCCTAATCCGTACACCAGGCAGAGTAGTAGTGTCCTTATTCAGCACCTCTTCAGGCAGTGTGGTCCAGACGATGGCTCTCCTCTTTgTGACTATATTGATAATAACAAGACAATAAATGTGAATAACCCGCACTACCCTGGTGCAGAGGCGGGACCTGGGGTTCTGAAAGCCGTATGGCAGTTATTACTGGCAGCTCTTTTCAAGCTCATCATCACTGTGTTTACGTTTGGGATCAAGGTTCCAGCTGGGCTGTTTATTCCCAGTATGGCTATTGGAGCATGCATTGGTCGCATTATTGGCATTGGCGTTGAGCAGCTTGCCGTctcCAACCCAGAATGGTTGGTGTTTTCATCCTCATGCGGCAATTCTATCAGTAACTGCGTCACGCCTGGTCTCTATGCAATGGTGGGGGCAGCTGCTGTGTTGGGCGGAGTCACCAAAATGACAGTTTCTCTGGTTGTGATCATGTTTGAACTAACTGGTGGATTGACgtacattgtaccactcatgGTGGCTATTATGACCAGTAAATGGGTAGGCGACGCCTTCATCAAAGAGGGAATATATGATGGCCACATACATCTAAATGGCTATCCATTCCTTGATAACAAAGAGGAGTTCACCCATACGACCCAAGCATCAGATGTAATGAGGCCACGTAAGCATGATCCAGCTTTGTCATGCATAACTCAAGATGAATTTACAGTTGGTGATCTAGagcAATTACTTGATGAAACTGAGTTCAAAGGATTTCCAGTAATAGTGGACAAAGAATCTCAGCGTCTTGTTGGATTTGTGCTACGTAGAGACCTTAAAATAGCTTTGAGGCATGCACGCATAAGGAATGAGGAGATTGTGAGCGCATCCAAAGTCTACTTTACAGAACAGTCAACCCGGTATGCTACCCCCGGTCAAGCTGCCCCTCTGACCCTTCGCCACATTCTAGACATGAGCCCAATTCAAATCACTGATGCTACTCCCATGGAGACGGTTGTGGAGCTGTTTAGAAGGGTTGGATTGAGGCAGACACTTGTAACACATAACGGtCGCCTTTTAGGTATCATTACGAAAAAAGATGTACTGCGTCACATAGCGacattagccaatcaggatcCAGAATCAATACTATTTTCATGATACTTGGCCTGTAGATGGCCTGACGACTCAAGaaccccttgtgtgattatgGCATGCTCTAACATGATTTTCAAATGCCTATATCTGATACACTTCGGCAAGACTCCGTTCTTGACCTCAAAGTTGCATAGTCTCTATAGCCAGTCACAGCAATTTTGGCAGTGAAATGTAAACATTATCCAAGTGCTTGCCACTGTTCAGGGAACACTGATTTGGTATGCTAGATTGCTCCTAAAGTGCAATGACTGTTTGATCTGGTAGTGATTCACCTTTCTACACGCTCAGTCTATCATCTGCAAATTTGTATTTTCTATCACATTCCAAGGGTTTGCACAGACTCTATCAGGCTAGGTCTCTTGTTGTGATATGACATCAGGGttggatccaggatttcaaaatagggggtggataatggctgGATAGacagcttataactgatcaagtggttcttggtaggtcactacatagatcttacataCTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9R279	H(+)/Cl(-) exchange transporter 3 OS=Cavia porcellus OX=10141 GN=CLCN3 PE=2 SV=2
P51790	H(+)/Cl(-) exchange transporter 3 OS=Homo sapiens OX=9606 GN=CLCN3 PE=1 SV=2
O18894	H(+)/Cl(-) exchange transporter 3 OS=Oryctolagus cuniculus OX=9986 GN=CLCN3 PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003874 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00654 all species →	Voltage_CLC	Voltage gated chloride channel	Family	Interproscan
PF00571 all species →	CBS	CBS domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR046342 all species →	Homologous_superfamily	CBS domain superfamily	Interproscan
IPR001807 all species →	Family	Chloride channel, voltage gated	Interproscan
IPR014743 all species →	Homologous_superfamily	Chloride channel, core	Interproscan
IPR000644 all species →	Domain	CBS domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45711 all species →	CHLORIDE CHANNEL PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005247 all species →	Molecular Function	voltage-gated chloride channel activity	Interproscan
GO:0006821 all species →	Biological Process	chloride transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005769 all species →	Cellular Component	early endosome	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0015299 all species →	Molecular Function	obsolete solute:proton antiporter activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05012	CLCN3_4_5; chloride channel 3/4/5	-	Ion channels	ko04040	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of XP_048589331.1 across 48 RNA-seq samples of Nematostella vectensis. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

48Samples

38TPM > 0

16Conditions

14.0Max TPM

7.0Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM
whole 6 week old aboral regenerate · regenerate 96hpa	3	3	9.48	10.21
whole 6 week old aboral regenerate · regenerate 144hpa	3	3	6.55	10.36
whole 6 week old aboral regenerate · regenerate 0hpa	3	3	7.80	9.00
whole 6 week old aboral regenerate · regenerate 2hpa	3	3	9.79	11.50
whole 6 week old aboral regenerate · regenerate uncut	3	3	6.80	8.34
whole 6 week old aboral regenerate · regenerate 4hpa	3	2	8.06	14.02
whole 6 week old aboral regenerate · regenerate 120hpa	3	2	6.00	10.54
whole 6 week old aboral regenerate · regenerate 36hpa	3	3	8.51	10.58
whole 6 week old aboral regenerate · regenerate 24hpa	3	2	6.49	12.12
whole 6 week old aboral regenerate · regenerate 20hpa	3	3	8.81	10.05
whole 6 week old aboral regenerate · regenerate 16hpa	3	3	8.34	10.22
whole 6 week old aboral regenerate · regenerate 72hpa	3	2	5.32	9.15
whole 6 week old aboral regenerate · regenerate 60hpa	3	2	5.13	7.85
whole 6 week old aboral regenerate · regenerate 48hpa	3	1	3.91	11.73
whole 6 week old aboral regenerate · regenerate 8hpa	3	2	6.89	11.51
whole 6 week old aboral regenerate · regenerate 12hpa	3	1	3.39	10.17

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6320863	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	10.21
SRR6320836	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	9.40
SRR6320837	whole 6 week old aboral regenerate · regenerate 96hpa	whole 6 week old aboral regenerate	six weeks	regenerate 96hpa	SRP125570	8.85
SRR6320847	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	10.36
SRR6320841	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	5.35
SRR6320838	whole 6 week old aboral regenerate · regenerate 144hpa	whole 6 week old aboral regenerate	six weeks	regenerate 144hpa	SRP125570	3.93
SRR6320846	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	9.00
SRR6320840	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	8.13
SRR6320839	whole 6 week old aboral regenerate · regenerate 0hpa	whole 6 week old aboral regenerate	six weeks	regenerate 0hpa	SRP125570	6.27
SRR6320861	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	11.50
SRR6320842	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	10.04
SRR6320848	whole 6 week old aboral regenerate · regenerate 2hpa	whole 6 week old aboral regenerate	six weeks	regenerate 2hpa	SRP125570	7.83
SRR6320843	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	8.34
SRR6320844	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	6.96
SRR6320845	whole 6 week old aboral regenerate · regenerate uncut	whole 6 week old aboral regenerate	six weeks	regenerate uncut	SRP125570	5.10
SRR6320849	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	14.02
SRR6320872	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	10.15
SRR6320873	whole 6 week old aboral regenerate · regenerate 4hpa	whole 6 week old aboral regenerate	six weeks	regenerate 4hpa	SRP125570	0.00
SRR6320882	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	10.54
SRR6320883	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	7.46
SRR6320850	whole 6 week old aboral regenerate · regenerate 120hpa	whole 6 week old aboral regenerate	six weeks	regenerate 120hpa	SRP125570	0.00
SRR6320855	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	10.58
SRR6320851	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	8.66
SRR6320852	whole 6 week old aboral regenerate · regenerate 36hpa	whole 6 week old aboral regenerate	six weeks	regenerate 36hpa	SRP125570	6.29
SRR6320854	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	12.12
SRR6320853	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	7.36
SRR6320856	whole 6 week old aboral regenerate · regenerate 24hpa	whole 6 week old aboral regenerate	six weeks	regenerate 24hpa	SRP125570	0.00
SRR6320860	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	10.05
SRR6320857	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	9.46
SRR6320859	whole 6 week old aboral regenerate · regenerate 20hpa	whole 6 week old aboral regenerate	six weeks	regenerate 20hpa	SRP125570	6.91
SRR6320880	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	10.22
SRR6320881	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	8.16
SRR6320858	whole 6 week old aboral regenerate · regenerate 16hpa	whole 6 week old aboral regenerate	six weeks	regenerate 16hpa	SRP125570	6.64
SRR6320862	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	9.15
SRR6320865	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	6.81
SRR6320864	whole 6 week old aboral regenerate · regenerate 72hpa	whole 6 week old aboral regenerate	six weeks	regenerate 72hpa	SRP125570	0.00
SRR6320866	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	7.85
SRR6320867	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	7.54
SRR6320869	whole 6 week old aboral regenerate · regenerate 60hpa	whole 6 week old aboral regenerate	six weeks	regenerate 60hpa	SRP125570	0.00
SRR6320870	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	11.73
SRR6320868	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320871	whole 6 week old aboral regenerate · regenerate 48hpa	whole 6 week old aboral regenerate	six weeks	regenerate 48hpa	SRP125570	0.00
SRR6320874	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	11.51
SRR6320875	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	9.17
SRR6320876	whole 6 week old aboral regenerate · regenerate 8hpa	whole 6 week old aboral regenerate	six weeks	regenerate 8hpa	SRP125570	0.00
SRR6320877	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	10.17
SRR6320878	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00
SRR6320879	whole 6 week old aboral regenerate · regenerate 12hpa	whole 6 week old aboral regenerate	six weeks	regenerate 12hpa	SRP125570	0.00

Source: CnidoSite RNA-seq expression matrices (NVECT_TPM, StringTie quantification over 48 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.