Gene detail

Detailed information of XP_048590088.1 in Nematostella vectensis

Genomic Location: NC_064044.1:746168...754511
NR annotation: XP_048590088.1, monocarboxylate transporter 12-B isoform X2 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_048734131.1

TCCCGCGCTTGGTTTGTGTGTTTCGCTGCCTTTGTGGTAAGCGTATTGATCATCAGTTGTTCTCAGACGTACGGTACGATTTTCCCCGTTCTTCTCGACGAGTTTCAAGAAGGCAAGGCGAAAACAGATATATACATGATCCTTGGagtcagaaaaaaaagcaagttAGAAGTATAGTTCATGGGTCGGCTCCTTGGCCATCGCTCTGTCCATGACCTTCTCCCCAATCGCCGCCAAGTTCATCGAGCGATTTGGACCTCGCCTCGTGTCCCTTATCGGGGGCATCGTCGCCGCACTGGGGCTTTTTATCACGTCCCAGATCAGCACCATAGATATCATGTACCTGACGTATAGTGTGGTGTTCGGGTTTGGCTCATCTTGCTTGTACACGTCGGCGTATGCGGTCGTGCCGGGGCACTTCATCAAGTGGCAGTCGACTGCTATCGGAGTGATGGGTAGTTCTGTCGGGATCTCTCTCATGTCCAGTATGCTCATCAAGACTTTGTTGTCCAAGTACGGCTGGAGAACGACATTTATGGTCATGGGGGGGTTTGCACTGGCTAGTGCTGTTATAGGAGGGATTTCCTTTGTGTCAAACACCACAAGAACAAGGGGTTCGTTAAACGATCACGTGTCGAATGATCACGTGACGCTTGGTGATGACGCGCCTTTATGGAAGAACAAGCAGTTGCTGGTGTGCGCAGGCGCCTGCTTTGTTGTGCAGTTTGGAAACACAATACCACTTGTTCATTTGGGCCGCTATGTCCAGGATGTGGGTCTATCGTCAACCCAGGCCGCCTGGCTTTATATCGGTTCTGGCGTAAGCTCAACCGTGGGCAGACTGTGTGGAGGGAGACTGGGTGACGTCATGTCCATATACTCCGTGTATATCTATGGATTCTCATGTTTGATTGCAGGGTTGTCCACGATTTCCGTATCGTTCACCACAGCCTTCCCGGTACTGATGGTGTGTTACTGTGTGAATGGTCTAGCTGAGGGCCATTACGTCTCGTGTGGGAACATAATAATCGTTCGCGCATGCTCAGCTCGTACTATTGCACGCGGGTTTGGATTATTCTTCTGTGTCATCTCGCTGGCGTATGCGACCGGGCCTGTATTTGGAGGTTGGTTGGCGGATGAAGTCGGCTCATATGTACCCGTCCTACAGGCGGCAGGGGCGATCTCGTGCTCAGGCTCTCTCATCATTTCCTCTCTTAAGTGCATAATGACTACAGCTAAACCACGCAAGCATGTACCACTATGTACTGGACCCGAGATTCTTTACGTGTGGGAGAAATTAACTGTTTTATAGCCACAGCCACCCAAGCAAGTACAGCTATGTGTAAGACCACGCAAGCAAGTACAGCTATGTGTAAGACCACGCAAGCAAGTACAGCTATGTGTCAGACCACCCAAGCAAGTATGGCTATGGCTAATGTTACCCAAGCAAGTACAGCTATGTGTAAGGTTACCCAAGCAAGTACAGCTATGCAAAAGGTTACCCAAGCAAGTACAGATATGTGTAAGGTTACCCAAGCAAGTACAGATATGTGTAAGGTTACCCAAGCAAGTACAGATATGTGTAAGGTTACCCAAGCAAGTACAGATATGTGTAAGGTTACCCAAGCAAGTACAGCTATGTATAAGGTTACCCAAGCAAGTACAGCTATGTGTAAGGTTACCCAAGCAAGTACAGATATGTGTAAGGTTACCCAAGCAAGTACAGATATGTGTAAGGTTACCCAAGCAAGTACAGATATGTGTAAGGTTACCAAAGTAAGTACAGATATGTGTAAGGTTACCCAAGCAAGTACAGATATGTGTAAGGTTACCCAAGCAAGTACAGATATGTGTAAGGTTACCCAAGCAAGTACAGCTATGTGTAAGGTTACCCAAGCAAGTACAGATATGTGTAAGGTTACCCAAGCAAGTACAGATATGTGTAAGGTTACCCAAGCAAGTACAGATATGTGTAAGGTTACCCAAGCAAGTACAGATATGTGTAAGGTTACCCAAGCAAGTACAGATATGTGTAAGGTTACCCAAGCAAGTACAGATATGTGTAAGGTTACCCAAGCAAGTACAGATATGTGTAAGGTTACCAAAGTAAGTACAGATATGTGTAAGGTTACCCAAGCAAGTACAGATATGTGTAAGGTTACCCAAGCAAGTATGGTTATGTGTAAGGTTACCCAAGCAAGTACACCTATGTGTAAGGTTACCCAAGCAAGTAGTTTagtttcagtttcagtttattgttttgtcacttaatacattttttaaataaagataataatataataatttacATAGTGTGACAAGGAGGACCGTAAGAAACCGCAAGGCTTATACGAGACGGTCCTCCTAAATCTTAACAGAAAATACTTATTTGATAGTTCGGACAGTCAGATtaattatataaatatttgttaggagagctttcatattttttttcatacttatataaaaaaacacacacacaaacacaaatcgagaaagaaaaaaaattaagagttAATAAGAGAAGTCTTTAACTTATTACAAAAAGAGTTAAGCGTTTTGGCAGACTGAATATCAAAAGACAATGAATTGAAATATTTACGTCCCTGATGTCTTAACGCAAACTTATGTATATTTGTTCTAAACTTTGAAATATGGAACAAGTTAGAGCTTCTCGTGTAATAATCGTGAATTTGAGAGTTCAATTGAAATATCCTGTTAAGTGTCTGGGGGAGTAACccatttttaaattgataCATTAACTTacctatttgaaataaaaataaataattgaatttcAATATGTTTAGATTTCTGTATATCGGATCAGTGTGTGCATCATAGGATGCTCCAACAATTATACGTATTGCTCGTTTTAGGAGCATGAGAATATGATTTAAATTAGATGGATAAGTGGATCCCCAAACACTAACACAGTATTGCAAAAATGGATATAACAAAGATTGATACAACGTCAATAGTGATTGCTTTGAAAGGCAAAAACTTGCTTTATACATAATTcctacagcttttgaaaccttACGCGCGACATTGGTAATATGTGGTAACCATGTCAAGTGTTCGTCAAGAATAACACctaaaaatattgtttctTTGACTCGCTTTATATTCTGATCACCTAAGGTGACCTTTATATCAaggttttgccttttttgccgTGGCCTAAAGATAATatagtttgatttttttatatttatagatAACTTGATTGCACAAAACCAATCTGTTAATTTGGTAAGTTCATTATTGATTGTGAGACATAATGAGTCTAAGTTTTTATGGGAGAAAAATATACTTGTatcatcagcaaataaaaGTATGTCTAAGGCGGTCAAAA

Protein

Uniprot

Uniprot term	Description
G5E8K6	Monocarboxylate transporter 6 OS=Mus musculus OX=10090 GN=Slc16a5 PE=3 SV=1
P53988	Monocarboxylate transporter 2 OS=Mesocricetus auratus OX=10036 GN=SLC16A7 PE=1 SV=1
O70451	Monocarboxylate transporter 2 OS=Mus musculus OX=10090 GN=Slc16a7 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050327	Family	Proton-linked Monocarboxylate Transporter	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11360	MONOCARBOXYLATE TRANSPORTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008028	Molecular Function	monocarboxylic acid transmembrane transporter activity	Interproscan
GO:0016021	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08187	SLC16A10; MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 10	-	Transporters	ko02000	deepkoala