Gene detail

Detailed information of XP_048590666.1 in Nematostella vectensis

Genomic Location: NC_064044.1:9947950...9953279
NR annotation: XP_048590666.1, CD209 antigen-like protein E [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

rna-XM_048734709.1

TGTTCAGCCGCATGGATACAGCAGTTTGTTTTTTCGTTTTTATGGTCGTACCATTCGACTTTTCTTTATCGAtgtattttaaaggttttcgGCACAAATTTCTCGAAGGTCCAATAATTTCAGAATTTTCCGTGCAAAGTGATTTTGAGTGTTTTCAGAAATGTTTGAAGGACAGCCACTGTTCTTCCGTGAATATCAAGACGATTACTGAGGAATCAAGTCCATGTCGGCTAATCGGCAATGTATCGAAGAGCAATTGCAACCACGGTTTGGAGTATACACACTACAAAAAACTGAGCCTCGCCCTATGCCCTCTCGGTTGGCACCACCATGCCAACAACTGTTATGTGATCAAGTTTGAGAACGTCACGTGGCAAGTTGCTATGCAACGATGTCATTCAGTGGACTCTGCGATGGTGTCAATCTCCAGTGTTGAAGAAAATGCCTTTGTTCGTGGTTTGTTCTACTCAGACACAATATGGCTGGGACTGGAAGACTTCAGTTCTGGTAGCTGGCGATGGGAGGACGGATCGCCCGCGTCTTTCACGTACTGGCAAGCAAGCGCACCCTCTGGTCAGTTGGGTCAGGACTGCGTCAAGATGTCTCATCAGAGGGGCAAATGGAACGACTGCCAATGTGATCTGCTACTTCCTTACGTCTGCAAGATGCCAGAGAACGCGATTACACCATTCTGTTAGGATTCTTAGACTCCCACCATTTGTTCCTCGcaaaaatgaattttaaccCTTAGGGATAGCAAAATGGGTGCGGTTTACATACATTTCTATCCCTCCCTGGGATAACATTAAAAACAGACAAATTATCAGTTATCTGAATCTTATTAACAGATGAATTTAGGAATGAATATCACTGTAATGAATGTAACTGTCAGACTGATTTGTCTTGCTTGGGTCGAGCTCGATGACACCTTTATAGCCTCTTATTATGAAAGACATCTGATACTTCAGTTAAGTACCAAAATGTGGTTTGATTAGCGTCTCACAACaaccctgctacggccctgttggATATTCCGTGCTCGTGGCCACGACCACAGAATGTCTGGCCCACGAACAgccatgagcacggaatttctggcacactagtcatgccatgagcacggaatttctggcccacgaGATGCCacgagcacggaatttctggcccacgtGATGCCacgagcacggaatttctggcacATTAGTCATGCCATGaacacggaatttctggcacACTAGTTAtgccatgagcacggaatttctggcccacgaGATGCCacgagcacggaatttctggcccacgaGATGCCacgagcacggaatttctggcacATTAGTCATGCCATGaacacggaatttctggcacACTAGTCATTccatgagcacggaatttctggccaACGAGATGCCacgagcacggaatttctggccctCGTGTCCTGCtacttattataaaaaaaattattaataaatacAAGAAAGGCTGCATTAGATTATTAGTCATAGGTAGCCCCATTTTCGCTCGGAATATacaaaatatttgaatataaaaatagaaaGATAAAAATCTGTTCACCCTTTACTTTCTTAAATTTATAGGTTTATGTTATGAAAACCATTAAAACGATGTAAAATTGTATATTAAAGATATTGTGGGACGCCTGATGGAATTGCGCCCCATTCCGAGAAGCAGTCTTGGCCAAGCTTAACTATTTGTCGGCGACAGGAGAGAAAATCAACAATCCACGAGATTACCGAGTGGGGGATGTCATAGTCGTGGAGCTAGTAGACGAGAATCCGATGGTCAATCAGGTCGAACGCTTTACGAAAGTCAAGTAAAATAGCTCTGACTGTCGCACCATTCCCGTCAGTAGCAGATAGCCATGAGTGGATCATGCTAATAAGAGCATGCGTGGTGTTTGACCCAGGGACAGTTCCGAATTGAGGCCGGTCAACCTTTGCTTAAATTGCTGGTTGAACAAAGTGCTCCACAAAATAATCCTCCTGTAACCAGAATtaaaattttaccgaggcaTGCAAAGCTTGCCACTGGATGGtaaatccaacaaaagcaggtgtTTTATCTTATACTCTTTAATTGTGAAACATTAAAATTTTATTGAATCGAGTGCCTCCCTTGCCTCATGCAGGCTACGGCCCTGCCCAAGTGCAGTGGGTTCTAGTCTCAGCCAGGATCACTTtaaattatagcctgcgtagcaagcgacCGTGCGACGAATGCAATGATTTAACGGTGCAAGTATGCGGTAAACGGAAACGAGAAGTAGGCCTTGTTATTCCTGGATGCTACACTGCGAGGACAAAA

Protein

Uniprot

Uniprot term	Description
Q9UBG0	C-type mannose receptor 2 OS=Homo sapiens OX=9606 GN=MRC2 PE=1 SV=2
Q64449	C-type mannose receptor 2 OS=Mus musculus OX=10090 GN=Mrc2 PE=1 SV=3
Q4TU93	C-type mannose receptor 2 OS=Rattus norvegicus OX=10116 GN=Mrc2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00024	PAN_1	PAN domain	Domain	Interproscan
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003609	Domain	PAN/Apple domain	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR050111	Family	C-type lectin and snaclec domain-containing protein	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22803	MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0038023	Molecular Function	signaling receptor activity	Interproscan