Genomic Location: ScUbCFx_1658:7586458...7593337
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families
| CDS |
| LOC135681051 |
| Transcript |
| rna-XM_065195330.1 |
| Protein |
| XP_065051402.1 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | UBD|Other|Beta-prp · all ubiquitin genes in this species |
| Ubiquitin family | E3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF21720 all species → | MIOS_WD40 | MIOS, WD40 repeat | Repeat | Interproscan |
| PF00400 all species → | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001680 all species → | Repeat | WD40 repeat | Interproscan |
| IPR036322 all species → | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR050853 all species → | Family | WD repeat-containing DNA damage-binding protein | Interproscan |
| IPR019775 all species → | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR015943 all species → | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14773 all species → | UNCHARACTERIZED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:2000001 all species → | Biological Process | regulation of DNA damage checkpoint | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K24755 | WDR76, CMR1; WD repeat-containing protein 76 | - | DNA repair and recombination proteins | ko03400 | deepkoala |
