Gene detail

Detailed information of XP_065051995.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_1659:11176107...11186131
NR annotation: no NCBI-NR hit recorded
Species abbreviation RESCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065195923.1

ACAGAGAGTTGTCATATTCACAGCTGACTTGAGGCAGGAACAACTTAGTGTCATCAACTCAAAATTTAGTGCATATCTTCGTGAAAATGCATACGTTAACAGACAGACCCAGCAAGCcatgaaagattttaatgaaaacattaaagaacAGTCTTTTATTTCACTTAAAACGTGCACCGGATTGTCTCAATTCGCTATAAAATTTACGGAATTCACAAGTTATCTCGACAAGCTGCTGTCGTATCATGTTTTAAGCAATAAAGAGGAATGCTCATGGTCATCGTGCAGCGAAGATATTGAGAAAGAGAACAAAGAGTTTATGAAATTCACCAACCAGTTAACAGTGACTATGTCTCGTCTGCGAATGACATTGTGCGTTTTGGCGTCTTTCGGCTCAAACAAGATAAATGTCTCGGAAAGTGGGCCCTGCTTTAAATTAATGGTGAAACAAATGAAGAAGCTCTTCGAGGTTTCGCAAGaGTTATGTAGATGCTACCAGTTGAAAATGCTTGCTGAAGAGCAATTGCCCATGATAACAGAGcGACTTAGAAGCACTGACCAGTGTATAATGTCGTCATTGGCTGGAATAGCCGGCGCAGCAAGCAAGtttGTTAAGTTCTTCGACGACAACATTGAATTCATAACAGCTAATAATggatttaaaagaaaaggagTCGTTGGTGATGGGGAAGAGGGAATTTCGTCTGCAATCAAGTTGTTCCATTCAAAAGCAACAGGTTACTTGCAGAGTCTCAGAAAGGACGTCCCGATAACCGTTCCATACGAAATTGCagtaaaaaataatagaaCTTTAATGACATCTACTGAAAGTAGAGACACGCTTGCGGAGGAGGTAACTCATTCAAAGGAAACcattgcaaaacttgaacagGAAAAGCAGCACTGGCTACTCGAGGCTCAGTTGCTCCAGGCCAAATTTGAGAAGGAAGTAAAAaaAGTGGCATCTCTCAGTGATGAGCTCGGAAAGCTGAAAACTGAAGCGATAAATAGCAGACAGTCGCCTGAGACAATTGACGATGTTTTGCAAAGAGATAAGTCTGTGGGCATAGTCTCGCCACCTCCCTTGATGAGAGAGGCCTCATCAGGCTCAACCTCAGCTGAACCTGTCTCGTTTTCACATcCTATTGGGACCCTAGAAGTTTGGAATAAGGAAAGGCAGGATACTGGGGATTCAGATAGAGATCACGAAGAGCTTGTCAAGAATCATCTTACAGCTAGAATTAATGACCTAACAAAACAGCTTCAACTTGCGGACAGTAAAGGAGTCACTCATTATGCAGAGTGTCGAGCTCTTTATAAACAACTGGTCCTTGCtgataaaagtaaaaagaggATAGCGAACGAGCTTGCACAGGCAAAAAGCAGACTTGGAACGTTGGAAgaTGATTTAGAGACGACGAAAAGAAGTTACGAGGACCAAATAAAGATGCTAAGTGATCACCTTTGCGGAATGAATGACAAGCTGACTTCACAAAAAGATCAAATCGATTTGTTGAAGACTGCAACTCCAAGCAAAGGGTCAAACAAGCTTGGCTTTGGGAGAAAGAAACAAGCATAAACATGATAACATGAAATGCAGCATAACTATGGAATTCCAATCATTGTACTAAAGATGTGAATTGTATTTGACAGAGAAACTTCGTAACCTGAACTGTACAAAGCATTTAAGAACTTCAATCAGTAGAGTAGAAAGCAAATCTAACGATTAACACTGAAAAGGTTTGCTAGAATATTTCTTGTGAGAATATATCATGTGGGAAAATATCATATGATATATCATGTGATCATTAGCCGACAAAACTAAAGATGCTAAtacttttctttcctttccgCCTTTCCATGTTGTTGCAGTACTTGATTTATAGGATGtcttaatttaaatttaatttttattgaacgAATTATAGAACCTTCCAAAACGTTTTTTGTATTAAGTTGGTTGTAAATCAGAATGTGATGTTGCCGGGCTTATAttctgattttatttttctccgaTGAGGAATTCTTGACCAa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10212 all species →	PPP1R21_helical	Protein phosphatase 1 regulatory subunit 21, six-helix bundle	Domain	Interproscan
PF21636 all species →	PPP1R21_C	Protein phosphatase 1 regulatory subunit 21, C-terminal	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040024 all species →	Family	Protein phosphatase 1 regulatory subunit 21	Interproscan
IPR019348 all species →	Domain	Protein phosphatase 1 regulatory subunit 21, six-helix bundle	Interproscan
IPR049372 all species →	Domain	Protein phosphatase 1 regulatory subunit 21, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21448 all species →	SMOOTH MUSCLE MYOSIN HEAVY CHAIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005769 all species →	Cellular Component	early endosome	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_065051995.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.