Gene detail

Detailed information of XP_065052507.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_107:3337888...3348315
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065196435.1

ACAGCATAATCAtgaaaaaaggctttgaaaaacgcCAGCTTACTTCCAGGGTGAAGTTTATTTGATAGAAGAGCAGGATTAGGGAAAATATGCTGAGAGCTAATGAGAACGAGTTACACGACCAGGGCAAAACTTGAACCCGGGCCCAGCGACTCTATAAGTCGTCCTGCCGTGCTCGGATCCCCAACCTAGATCTCTAGAGCAGGTAAATCGTAGTgtaatcataataataatgatttgTATCAATGCCTTTGCATAGGCCAGTTGGAACATTGCGACACAAGTCAAAAGACTCGAGCATATCACCAAGACAGTACACATAAACACAAGAATGTTACTCGCAAAAGGCAAGCAAATATCCCTAAAATTTTAACTGAACAAGAAGAGTCGCCATTTTCTAGATCGTCGTTTGCGGGAAGCACAGCAAGTTCAGTGGACGACTATTTTTCACTCGGTAGTGCTCAAGATGTGCAGTCTTCGAATGGCTACTTTCGTTTTGATGAGAGTAGAATCAACGAGGATCTCTCTTTATTAGAGAACATCGAAAGGGGTGACAGCGTAAGTGCTGAAGATAACTCTGAGGAACTAAAACCAGTTCAGTTACCTGACTGGGTACAAgatttcattgacaaaaaGCGCAAAGCCCAGCTGGATTTAGAAGCAGCAAGACAAATGCCACAAGAAGATATGCCAATACCAGTGTGGGTTGAATGCGTAGACGATGATGGTAACGTCACTGTGACTGCTGCAGAGATCAGCCTGCCTCCGCATGGAGCGGCTAGGTGTTTAGATAATACAGCATCGTTAATGGAAAAGCAAGCACCACGTCCAATTGGAATGGAGAGCAGAGAGTTTCCTAACGCCCAGATAACAGCATCATCTGAGCAAGGCCCATATTACAAAGCTCACGAAGCACGACTGAATAATAAGCCTAAAGGAAAGATTATCGGAGCATGGTGCCCGAAGAATCATGATGATTGCCAGTGGTTACAAATAGATATGGGGAAAGAAAGGAATGTGCAACAGATAGGGACACAGGGAATGCCACTACTATCTGTAAGAAGACCAAAAGACAGAAGATGGGTTGAGTCATATGTTTTCTCGTATAGCAGCGATGGTTTGAAGTGGAAGTATTACGAGGATGAAAATAACAACCCGAAGattttcattgcaaatgtCGACTTAGAAAATACTGCGAAGAACTCGTTTGTCAGTGGATTGAAGACTCGATATTTGCGAATTCATCCAACATCTTGGAGCACTGGCATAGCTCTTCGTGTTGAGATTTAcgttgaaaaagaaactaaagGTAAAGAAGTTGAGACGAGGGATTCAGTCTCGTTGAGTGAAGCTGTCACTAAAAGTCTCTATTCAGACGATGATAGAGAAAGCTGTAGTGAGAAACACTCAAGCGAAGAAAGCGATTCAGGCTCTGAGTACATCCTCCACGaTCACTTAGATGATGAGGAAGACGACATTTGCAATGCTGATGAAGCCAAGAACCTATCAAATTCACTAAATTCCGCTGCCTACGTTGAAGAAGGGGAAAGGTTCTCTCAAGCTTCGAACGTCAAGGGTGTTGCTAGTGACGGGTTCCGTACACGGCTTAGCTCTTTCCGAGAATCAGCTCAATCGGCTTCATTCGAAACAAATAACATCAAAGaggTGCTCGCATCCAATGAGgaaagcatttcagaatcacCCAGGCACACCAAATCAACGATTGGGTCTAAAATTAGAATCGAGGAGTTTTTGAGTCAGCAGAGACCAGGAGACAGGAGAAGATTGACATTCCGTGCTATTGTAGGAAGATTAATGTCCATACCAAATATAAGCACTGGACTGACTCTAGATGCAGAAGAAGAGAAAGATGAGTTTCTTTCAAAGTATTGCATATTAAAAGATAGCCAGAAAATTCTGTTCTCAAGAGTCTTTCAAAAGCTTGATCATGACTGTGATGGACTGATCGAGAAAGAGCAGCTAATGGGTGGTTTGGCAGCCTTGAACTTGAACTCTCTAAGAGACGCTGAAATGAACTACATCATGGAGCTAATTGACGTTTTCGACGAAACAATTAAAGAGGGTATTGACCAAAAGACCTTTAACGTCATCGCAGCTTTTGCAGATAGACTGAAACGTGTCGACGCATTTACAAGAGGCATGATCAGAGATACTAACTTTGCCACATTGTATTTACACGCACATAAAACGCGAGATTTGTTCGAGAAGATGCTCGATAAAGGCGAAACAACTATCAGTAGTGAGCAGTTCCTGATCGAACTCGAGGCTGGTGGCGTCAAGTCTGAGGCACAAAATCTCGTGCGCACATACACAGACgagaaaaaacatttggaCTTTCTTGACTTTGCAATCTACTTTCCACTGTTTCTACATACACATGAACAAATCATGTCAACACCATTGTagaattttccatttttgaaatatagtACTTGAATTTTGCAACTTACTCAAACATCCGAGCATTACTTATCGTTGGAAACAAAGCTTTAGAATTGTCTTTAGGAGCAAAGTATCTCTCAATTGCACAGACCATTGCCCACTCTCTAACGTAAAGGACATTAGGAACCTATTCACAAATAGCTTTTAGGTTGAATTCCGTAAAAACCCACATATTATAAGAAGCACATGAAAAGGTGCGTA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00754 all species →	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR000421 all species →	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR35538 all species →	LIG_CHAN-GLU_BD DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_065052507.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.