Gene detail

Detailed information of XP_065053221.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_1662:5258329...5263841
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065197149.1

CAGGAAATATTTCCTTTACCTTTACGGTCGGGTTTTGTACATCTTTTCACCAATCGAACTGAATCTTTGACGAATTCTTTGCATGGCTCCAGGGACTTTTGTACTTGATCCATTATAGCTTTGGTTTTTTACGGAAAAATGCtttagataaagaaaattttgcttgtaaaattttcacGTATTTCCAGCTACTGCTACGTCACCTAACAAGGCTGTAAAGAGAGAACCTCGGTTTCAAATGACAATTATAAACAGAGACCGCTGACCAAAAACCGGATATCCAAAAACTTGTGCCTCTAAATGGAGAGGAGGTTTTCAGAGAAGCTAACACtcagaaaaattgaagtcCAATAAAATCAACCTATAATGAAGTCGTTAGAAGTGGCAATAATTTTATTCTGCTTTGTTTTCACATTGATCCAAAAGACCGATGCACAAGCCTGCAGTCCTATTGACCAGTGTTCTTGTCGTATTCCGGACGGACCAGTGATTTCCCTATGGGATATTGATAAAAGGTATGAAATTGGAAGTGTTGAGCCTGGCTTTTCTTATCTTTATCGCCCATGCACAGGCCTCAAAGAACCAAACTCAGTGTGTGATGGTTCATTGGGATGCCAAGTCACTGAAAGTGATAAATCCAAGGTTTTGATTGCAAAGAAGCCAAAATTAATAGATGCTGGAAAAGATTCAGGTACAGGCCTGTATTACTTTACATACACAGGAAGCAAGGATCAAGAAACACAACAGACTATCACCTTGAAAATAATTCTACAGTGCAGTGAGAATGAAGTTGcaagttttacaaaaatgtttggttGCCTAGCTGATAGCTGTATTATAACCCTGACTTCAAAATGTGCATGTCCAGGTCATTGCAAGGttccaaaaaaatcatctGCGGCAACAACCTCTCACAAACTGAGCATTGGTTCAACTCTTTGTATTGTTCTACTTGCTCTACTTGTTGCATACCTTGTTTTTGGTTTGCTGTTAAACAAATATGCCTTTCATAAGGAAGGTTCAGAAATCATACCTCAGAAAGATCTTTGGTCTGGCTTTCCATCACTGGTCAAGGACGGTTGTGTGTTCACTTTCCATAAATTGCGGAGAAAAAAGGGTGAATACCAAGAACTTTAAGGCTGATTGATGCCTGATACATACGGGGAATGCTCTGAGTTTTGCATATATTAAATGGAGatgattttgctattttttatcctaatttatacaaaaatgaaattgaacaTATCGATGccaccaaaaaattttatatctaGATTGTGCTTAATTTTTCGAccttcgaaaaaaattttaacctCGAATTGCATGTATTCTTTATCAAAGTACCACTACAGTTGCTATTGATCGTGAAGTTctgatttagaaaatatttttttttatttcattgattttcttAGCCTATCTTACATTTTTGACATTGCTATTGAATTAACTCttagatttattttatctttttatggTATAGTTATCTCATCCAACACAGTTTATTGCATTGATTATATTGTAACATTACATTGGAATATAATGTAATATCCACATAGAAAAACATGTAGAGAAATTTAATGAGCAATCGGGAGCATCCTCGACATTAGAAAATTAGCAGCTAAGCCTAGATGGTATTGATGTTGTTGTCAGCAGCATAGCCAGGGCTTCAATTCTGGAGGGGCAAAATAGcagaacatttttctttaagctTATATCTGAGATACTATCCTATCTTAAGATAAATTCTCAGTACCCTGAATGCAATTTAAAGCCTGAGTAAGACAACACCAGATTTGTTGAACTATGGAATGTCAGGGGTTTGGGTGCCATGATGTTGAGGCAATCCGAAATGAAAACGAATCCGTTGTGTAACTTTTGCATTTACCCGACTTAGTGTCAAGAAGCAGTTctattcaaacttttattCCGTAGTTTCACTGACAGAATGTACTCCAAACCCACTGCTTCCACAGTCCATTCTTCCATAATGATGCTAATAATGTTTTTGCTCAATATTCTTACTTGACATTGTGATTAAGAACAGGATTATTCTGTTGATactgttgatatttttatactTATTAATTCTGCGTTAATTCATTAATTGAATTcgttcaaagcaaaatttttatatcgATACTAGCTGAATGAATTCCAagcattttaaattaaatttgccGCATTTCTAATTTGTAAATTGTTCCTTTGATTAGAGAGAGAATCAAA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09451 all species →	ATG27	Autophagy-related protein 27	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009011 all species →	Homologous_superfamily	Mannose-6-phosphate receptor binding domain superfamily	Interproscan
IPR018939 all species →	Family	Autophagy-related protein 27	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15071 all species →	MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005802 all species →	Cellular Component	trans-Golgi network	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10089	M6PR; cation-dependent mannose-6-phosphate receptor	-	Lectins	ko04091	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.