Gene detail

Detailed information of XP_065053294.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_1662:3320271...3329291
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

LOC135682359

ATGTTCTGTTGTGCTCCGCCGAGTGTTCGAAAATTTTTCTGGCTGCATCATGATCATGAGGGATACCAAAAACTTGGAGACCAAACGCAACTCTGCATAGTCTACGACTACGATCTATTTCGCAAAAGTAAAACGTATCTACCGAAACTGCGGGAACACAAAATACAAGAAGAGCCAAATTTCGTTATTGACGATCCTTCGAGCATATTCTTTGATCCTGATGAAAAAGCAGGATTTGTCTACGGTTCACACGGAGATAGTGATGATGACCTCGAACTGGAAGAAACAAACGAGGCTGAGAGGATTGACGCTATTATACAGCAAAGCGGTAACATTAGCCACGATACCTCACTGGAACTTGACGATAGCCTCGATCACATTCCTCAAACATCAACGTCTTCTGCTATGAAAGATGCCTCGTTTGATCAAGAATACGGTGTACAGTCAAGACGGGAGTCATCGGAGCCAGAACTGGCTTATTCTTGTGATGAGGCAGATTATCATCGTTACGGAAATAATACACCAGTCAATTTAATGCTCTCTTCTGACAAAAGTAACCTGAATACAGAACTAGGTAGTATGAGGTTGTATGAAGATTCAGGTTATGGATCTGGAGGGCAACGTCAGAGGAAAGACTACAACTCGGACGCAGAAAGTACAAATAAATATCAAGATTCTGGAATATATGAAGACGATGTTTTCTTAGATTCACCAAAACATAATTCGGGAAATAAGACAGAAAGCGAGAGTTTTATACACGACGTTGAATTTGAAATGGACGATTTTCTTCCTGAACACTCCGAGCGCAACACTGCATTCAAAACACCCAGCAGCTCACCTCTCAAATTAGAACCAACAGTTCCCTTGTCGAGAATAAACGGAAGACAACAAAAACCTAAAGGGCGTCTAAGTCGCTTTCTGCAACAAGAACGAGAGGATGTTCCAATACTCTCAGGCTGTGACGGCTATTACAACTGTGACAAAGGAAGAGACACGAATCAATCTACATTTTTCAATGATCGAACAACAAAACCGGTTGTGCGCAGATCCTCTGGAAAATACAGTCATGTGCAAGCAAAGGTTCAAACAAGGCGGACATCTTCTATATCGCCACGGAGACCTTCATCACCATCGGGAAGGTCATCGTCCCAGGGAAAGAGGACCACTACCAGTTCAACAAACGGGCGATCAAAATCGACGGAACCCAGTTACAAACCGATGTACTTTGGTCGTCCAAAGATTGAGAATATAAAGACAGAGTTTCGGAAAACTGCCAAACCAAAAGTCGGCTCTATGGAGAACGTTGGTCATACCCCAGGAGGAGGGCAGTCTAAAGTGTTCCAGCAAAAGTTGAGCTTCCGTAAAAATGCCGAGTCAAAAACAGACACACACGGTGTTGAAATGTACAGTCACTTGCCTAAAGAATTCCAAGAAATAGCGCGAAGACTTTCCCGCCAAGATCATCATTTGAAGGCGAATGGCAAACAAGGTCCGCGTGGTCGAACGAGCAGCAGAAGTAGCTCCGCGGTAGGATCCAGTAGAACATCGAGTGTCAGTCCAACAAGGGGGCGTAGCAAAGTCAGAAACCGACCTCCAACACCAAGTCTTCCTTTACAGAAGACTACTCTTCGGCCAACCAGCCCGAGTCGACAGACAACCCTGAGTCGATCACCAAGCATTCGATCAATCCCCACAACCCCAGTTTTGCACTACAAACATCCAGCAACTTCATCAATACTGTATGACAAAAAATGCAGATCACGGAATGGTTCACCTTGCTCTTCCAGAGCTCAAAGTCCTACAAACTTGCGATCAAATTGCAGTTCACGTGCCAGTAGCCCTACTGGTACCAGATCGAGGTCAAAATCAAGGTCACGACCTGGAACGCCGAAAAATGGCGAATCGCAGCCGACCACGCCCATCCGACAATTGTATCAGTTCACACAGGCGAATACATTTATTCCTGGATCTCCAAAGTCTGCAGGACCCCAACCAGTGTTTCACTTTGTTCCAGTGAGGTGA

Transcript

rna-XM_065197222.1

AGGAAATTTAACCACTTTGGAATATGTTACTACGAGCGAAATGGGATTCTTCAACCCTAGCAATATTATCTCAAGGGGAATCAAAGTTGTCAGCCCCTATTTCATTTACATGGACTACAGTTAGGAAAAAGGCTGTCGATGCCcctgacaaatattttttgtcagttaaaatttttagttgatcGCAGAAGTTCATTAGAATTGCGGAGAGTGATTAAAAGGGTTGATACCGaaatttgaacaatgttttgcGAAAGAAAGCTCATCTCTTACACAGCTGAATCAGTGGCAATTTCTTCTCAAATTGTTGCGCGTTTGTACAAGAATACCTTTCCTGTCAAGCAAGTTATTACCAAGAGCACTAGCAtcatgaaaagaaacattttgaaattcatagACGAAAGAATTAGTTGTAGtagaaatatctttcaaaaagagtcgtataattgaatttttttcaaggttcAGCACTTTGTAACATAGAAACGTCGCTccataattttgatttgcaaCGCGAAACAAGCTTAACAATGCAGCTTATTGAAGTCCACTTATTAATCGAcaggaaaaaaaatatatccaAGATGATTGATTTCCAAGGAAGATCCGGGTTGTCCTATACAGGAAAAATTACAGGAAAactatcttgaaaaaaatccttTGTAGTTTACGACCGAGAAAAAACATCATATGTTTTATTCCTTTTAGTCTAATCTTAGAATTTTGCTCCAGTATAAGACACAAACTACATGCATTCAGCGAtgcaatttgcaaaacaacatctgttacattttttttaagtcTCTGCGCAGAGCTAGCTGTTAGTACATTTCATCATAACGTTAAATTAGAACAAACAGGATCTGCCGATAAATAGGAACTCGAGAGCAGCGTTGTGGAAACTTATTTTTGATTCtctttttcttggaaattcaCTTAGAAACAATCAACGCCTCTTTGATTTTTAGCAATAGTTTCATATTCCACTAAAgtttgaaacagtttttagGAAAGTAATAGAAAGGTGAAGTAGGTTCTGCAGAATGCAAATCAGTGGTAAAAAAGTCACAAATTAGACCAAGATATCTCAGAGAAGCAACTCCTGTGGCCAATGAAGTCATGAATCGCATAATGTCTCACTAGCATTCGCGAAGCAACTTAATTAGGTACTTTAAATGAGCAAATCAACcttaaattgaaagaaatggcAAAAGTGTTTGCATACAGCTACTGATCTTCCGATTTTTGATCTGGCTTCCCAAATCAACAAACATGGATGTGATCTGTGGCTCTACCTGCACATCTACTTCAAACGCTGCACCTGCGAAAGTCGAGGCTACAGTGATTCAATTTTATCTGAATGAAAAGGTCACCCGTACAATTGTGCCACGTTCAATCTCTGGGGAAAGACTTGACAGCAAGCTGCCCAAAACAGAGTATCATACTTTACAAAATAGTGAATCTAAACAAGGAGTAATACGATTTGAAAGTTTTACTGCAAAATTCTGCAAAGAGTTAGCAAAGGAAAACGTCGGGTAGAcagaatttctttgtttttgttcttcaaCAAGACGGTTAAACTGAGAGAGACTTCACGCATGAAGGAACAAGCAACTCTTCCGTGACTTAACCAACGATGTTCTGTTGTGCTCCGCCGAGTGTTCGAAAATTTTTCTGGCTGCATCATGATCATGAGGGATACCAAAAACTTGGAGACCAAACGCAACTCTGCATAGTCTACGACTACGATCTATTTCGCAAAAGTAAAACGTATCTACCGAAACTGCGGGAACACAAAATACAAGAAGAGCCAAATTTCGTTATTGACGATCCTTCGAGCATATTCTTTGATCCTGATGAAAAAGCAGGATTTGTCTACGGTTCACACGGAGATAGTGATGATGACCTCGAACTGGAAGAAACAAACGAGGCTGAGAGGATTGACGCTATTATACAGCAAAGCGGTAACATTAGCCACGATACCTCACTGGAACTTGACGATAGCCTCGATCACATTCCTCAAACATCAACGTCTTCTGCTATGAAAGATGCCTCGTTTGATCAAGAATACGGTGTACAGTCAAGACGGGAGTCATCGGAGCCAGAACTGGCTTATTCTTGTGATGAGGCAGATTATCATCGTTACGGAAATAATACACCAGTCAATTTAATGCTCTCTTCTGACAAAAGTAACCTGAATACAGAACTAGGTAGTATGAGGTTGTATGAAGATTCAGGTTATGGATCTGGAGGGCAACGTCAGAGGAAAGACTACAACTCGGACGCAGAAAGTACAAATAAATATCAAGATTCTGGAATATATGAAGACGATGTTTTCTTAGATTCACCAAAACATAATTCGGGAAATAAGACAGAAAGCGAGAGTTTTATACACGACgttgaatttgaaatggaCGATTTTCTTCCTGAACACTCCGAGCGCAACACTGCATTCAAAACACCCAGCAGCTCACCTCTCAAATTAGAACCAACAGTTCCCTTGTCGAGAATAAACGGAAGACAACAAAAACCTAAAGGGCGTCTAAGTCGCTTTCTGCAACAAGAACGAGAGGATGTTCCAATACTCTCAGGCTGTGACGGCTATTACAACTGTGACAAAGGAAGAGACACGAATCAATCTACATTTTTCAATGATCGAACAACAAAACCGGTTGTGCGCAGATCCTCTGGAAAATACAGTCATGTGCAAGCAAAGGTTCAAACAAGGcGGACATCTTCTATATCGCCACGGAGACCTTCATCACCATCGGGAAGGTCATCGTCCCAGGGAAAGAGGACCACTACCAGTTCAACAAACGGGCGATCAAAATCGACGGAACCCAGTTACAAACCGATGTACTTTGGTCGTCCAAAGATTGAGAATATAAAGACAGAGTTTCGGAAAACTGCCAAACCAAAAGTCGGCTCTATGGAGAACGTTGGTCATACCCCAGGAGGAGGGCAGTCTAAAGTGTTCCAGCAAAAGTTGAGCTTCCGTAAAAATGCCGAGTCAAAAACAGACACACACGGTGTTGAAATGTACAGTCACTTGCCTAAAGAATTCCAAGAAATAGCGCGAAGACTTTCCCGCCAAGATCATCATTTGAAGGCGAATGGCAAACAAGGTCCGCGTGGTCGAACGAGCAGCAGAAGTAGCTCCGCGGTAGGATCCAGTAGAACATCGAGTGTCAGTCCAACAAGGGGGCGTAGCAAAGTCAGAAACCGACCTCCAACACCAAGTCTTCCTTTACAGAAGACTACTCTTCGGCCAACCAGCCCGAGTCGACAGACAACCCTGAGTCGATCACCAAGCATTCGATCAATCCCCACAACCCCAGTTTTGCACTACAAACATCCAGCAACTTCATCAATACTGTATGACAAAAAATGCAGATCACGGAATGGTTCACCTTGCTCTTCCAGAGCTCAAAGTCCTACAAACTTGCGATCAAATTGCAGTTCACGTGCCAGTAGCCCTACTGGTACCAGATCGAGGTCAAAATCAAGGTCACGACCTGGAACGCCGAAAAATGGCGAATCGCAGCCGACCACGCCCATCCGACAATTGTATCAGTTCACACAGGCGAATACATTTATTCCTGGATCTCCAAAGTCTGCAGGACCCCAACCAGTGTTTCACTTTGTTCCAGTGAGGTGACCTCCAGATAGCAacactttatttcaaatggaGGAAATATCAAGGATTCAAAGGCGAGTGTAACATCGTGGATTATAGAAACACAGATCGGTTCTGCACTGctcttttcttgaattcaagACGTATAAAAAAGTTAGAATAATAGTGAACGTTTCAAGAGACTAATCACTATTTTTAGCGAATACAAATTTAAATGGGACCAAAGAAATATATTGTAACTAtaagcataaaattttaaatgatgtTTACTTTGGATTTGTTAGAGATTTTTTGCGAGCGGTTGAACTTGTATTTTTACATAGTAACATATATCATTGCAAACAGAAGTGTTTGTCACTAGTGATTTCTATCACTATTCCTCGTATACAGCATTTCAAGAGAGCATGAACATTTCAAAGCATACAGAGCCACAAGGACAGCGACTTCTCGAAACCGAAACTTCAAAGACAGCAAAAACGTGACTTTGTCAGGTGCTAGGAAACGAGTGAGAGcaggtgggggggggggggctggttAAATCCATTGTCATAAGAAATCTCTTAAACATCTTgaagaaaa

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00418 all species →	Tubulin-binding	Tau and MAP protein, tubulin-binding repeat	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027324 all species →	Family	Microtubule associated protein MAP2/MAP4/Tau	Interproscan
IPR001084 all species →	Repeat	Microtubule associated protein, tubulin-binding repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11501 all species →	MICROTUBULE-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0015631 all species →	Molecular Function	tubulin binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_065053294.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.