Gene detail

Detailed information of XP_065053472.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_1662:2895323...2899017
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09793 all species →	AD	Anticodon-binding domain	Domain	Interproscan
PF21166 all species →	LSM12_LSM	LSM12, LSM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019181 all species →	Domain	LSM12, anticodon-binding domain	Interproscan
IPR039683 all species →	Family	Protein Lsm12-like	Interproscan
IPR048478 all species →	Domain	LSM12, LSM domain	Interproscan
IPR047574 all species →	Domain	AD domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13542 all species →	LSM12 HOMOLOG	Interproscan

Gene Ontology

No Gene Ontology signature was recorded for XP_065053472.1 in Rhopilema esculentum.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23643	LSM12; protein LSM12	-	Circadian rhythm - fly	ko04711	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.