Gene detail

Detailed information of XP_065054643.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_1672:4061248...4071475
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-XM_065198571.1

CTTCCTGTTAGAGCTGTGGAGATGGTAGGAGAAGGTGGCAAATTGTCTACAAATCGAACGAAGAGAAGCATGGTTAAATTACTGCTGtagatataaaaaagttaaaaagagtAATCCAACATGCCTCACACAGACTGGAAAGCAAGACTTGGATTCACAAATGTTGACATCTTGAAGGAATATACGCCACCAGAGGTTATAAAGAAGTATTATCCTGGAGGGTATATTGGGTTTGATAAACATGGCAGTCCAGTTTTCATTGATCCAGTTGGAATGATTGATTTCAAAGgCCTTCTTCATTCTGTGAAGGGAGATGACATTCTGAGAACGAGAATGTTTATAGCAGAACAAGGAATACAGTTATGCAAAGAGCAATCTGAAAAGCTTCAGAAGAATATCAATCAGActacattgatttttgatttgcaTGGCCTTGGTCTAAAACATATGTGGAAGCCAGGTGTCAGACTTTTCAACGCGATTGCGACTATGTTTGAAGACGATTACCCGCATCTTATGAAGCAAACATTCGTTGTAAATTCACCAAGAGTTTTCCCGGTCCTGTTTGCATTAGTAAAACCATTCCTGAGcgatgaaacaaaaagaaaaatcaaaattttaggaGGAAACTGGAAGAGTGAGCTTCTGAAGTACATCGATGCCAATCAACTCCCTGTTCATTATGGCGGCACATTGTTTGGAAAGGATGGTGACACAATGTGCAAGGAAGACgtATGTTATGGAGGTGAGGTTCCAAAGTCCTACTATTCTCATGACgaaaagatggaaaatgaTGGCTACGAGTATACTTTGGTCAAGCATGGGTGTGAGTTCAACCTTGAATACAAAGTTACTGAGCCAGGGAGCATCCTTCATTGGTACTTTAGGACTGAGGGGTATGACATTGGGTTTGGAGTTTATCGAAAAGAGGAAGGGCAAAGCAACGGGCGAATGGACGAAATAATTGCATTAGACAAAAGAGAAAGTCATCTAATTGCAGAAGATGGCTGTTACACATGCAGTAAACAAGGCATTTACgttgtaaaatttgataacTCTTACAGCTGGACGAAAAGCAAAAGGCTTCATTATCAGATAGGCCTTACACCTTGCGCCGGAGGATTGTAGGCTGTTCACAACCTTATCGATCGTATTTGCTATTcgctgaaaaaaaattacgcTTGCTCATCGTTTAAATCTATTCGAAAGATTATTTGTTGATATTGCATCGCAGTTAAAAACTCGTTCCGCTAAAAATTACTGGAAATGCAGTTGCTTTCACTCTCTCATGTTACTTTTCATGCAGGTTTTTACTCTAGGTTCCAGGTACTTTATGTCCACTGTTAAACAATACCGCTGCTATTAATGATGGGGTAGCTGATGCTTTAGGGGGCCTAGCATAAATCTTGCCCTGGGGGGCTTAGCATAGATCTGCCCTAGAGGGCCCAGCATAGATCTTGCCCTGGGGGGCCTAGCATAGATCTGCCCTAGAGGGCCCAGCATAGATCTTGCCCTGGGGGGCCTAGCATAGATCTTTCCCTGGGGGGCCTAGCATAGATCTTGCTCTGGGGGGCCTAGCATAGATCTTGCCCTGGGGGGCCTAGCATAAATCTTGCTCTGGGGGGCCTAGCATAGATCTTGCTCTGGGGGGCCTAGCATAGATCTTGCTCTGGGGGGCCTAGCATAGATCTTGCCCTGGGGGGCCTAGCATAGATCTTGCTCTGGGGGGCCTAGCATAGATCTTTCCCTGGGGGGCCTAGCATAGATCTTGCTCTGGGGGGCCTAGCATAGATCTTGCCCTGAGGGGCCTAGCATAGATCTTGCCCTGGGGGCCAAGCATAGATCTTGCCCTAGGGGGCTTAGCATAGCTCTTACTCTAGGGGGGCCTAGCATAGCTCTTGCATAGAAATGTTATTGCTTTATTTAGATTGAAATGCCCGAACGAGGCTTGAAATGCCATAAATTTTGCCGAATTAGGGGATTTTAGCCTTCCACCCCCAGGTCCTCTACGCCTATGATCAAGGCAACTTTGTCATTGTATTCTTAGTCCGTCCAAACAGTGGTTTCTTGAGTATTAACACGAACAAGCAGAGGAGAAAAGAAACGTGccaattttcttttgccatATTTAGCTATGGAAGGCCAAGAATGTAACAGAAATATCTTGTTATACACCCTAATGTGCCCGaatcttcaaaatgtttctcaGAGTTACTGAAAGAACAGGTGTTTCAGTGTTAATtctatcaaataattttttttcagttacACAGTGCAAACTTGCCGAGAATTAGGAGAAGTTACTTATTTCAAATTAGTATTAAACTGTTTAGAGGTTTACCCATAATTTCAGCTTCCTGGTTTTCGAAGATCTTTGATTAATCTCATCATAAGAAAAGATGTAGAAATAGTGACACAAGTTGCTGTGTTTTCGTTAATTATGTCGTAATGTATCATatgaaaaatctgaatta

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13897 all species →	GOLD_2	Golgi-dynamics membrane-trafficking	Domain	Interproscan
PF00650 all species →	CRAL_TRIO	CRAL/TRIO domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009038 all species →	Domain	GOLD domain	Interproscan
IPR051064 all species →	Family	SEC14-like and CRAL-TRIO domain-containing protein	Interproscan
IPR036865 all species →	Homologous_superfamily	CRAL-TRIO lipid binding domain superfamily	Interproscan
IPR001251 all species →	Domain	CRAL-TRIO lipid binding domain	Interproscan
IPR036598 all species →	Homologous_superfamily	GOLD domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23324 all species →	SEC14 RELATED PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for XP_065054643.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.