Detailed information of XP_065056378.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_10:8489119...8538772
NR annotation: no NCBI-NR hit recorded
Species abbreviation RESCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08512
all species →
Rttp106-like_middleHistone chaperone Rttp106-like, middle domainDomainInterproscan
PF08644
all species →
SPT16FACT complex subunit (SPT16/CDC68)DomainInterproscan
PF21091
all species →
SPT16_CFACT complex subunit SPT16, C-terminal domainDomainInterproscan
PF00557
all species →
Peptidase_M24Metallopeptidase family M24DomainInterproscan
PF14826
all species →
FACT-Spt16_NlobFACT complex subunit SPT16 N-terminal lobe domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013719
all species →
DomainHistone chaperone RTT106/FACT complex subunit SPT16-like, middle domainInterproscan
IPR013953
all species →
DomainFACT complex subunit Spt16 domainInterproscan
IPR029149
all species →
Homologous_superfamilyCreatinase/Aminopeptidase P/Spt16, N-terminalInterproscan
IPR040258
all species →
FamilyFACT complex subunit Spt16Interproscan
IPR011993
all species →
Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR029148
all species →
DomainFACT complex subunit Spt16, N-terminal lobe domainInterproscan
IPR033825
all species →
DomainFACT complex subunit Spt16, peptidase M24-like domainInterproscan
IPR036005
all species →
Homologous_superfamilyCreatinase/aminopeptidase-likeInterproscan
IPR048969
all species →
DomainFACT complex subunit SPT16, C-terminal domainInterproscan
IPR000994
all species →
DomainPeptidase M24Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13980
all species →
CDC68 RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006368
all species →
Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0031491
all species →
Molecular Functionnucleosome bindingInterproscan
GO:0035101
all species →
Cellular ComponentFACT complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K25639SUPT16H, SPT16; FACT complex subunit SPT16-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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