Gene detail

Detailed information of XP_065057474.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_1682:7723730...7728566
NR annotation: no NCBI-NR hit recorded
Species abbreviation RESCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01300 all species →	Sua5_yciO_yrdC	Telomere recombination	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050156 all species →	Family	Threonylcarbamoyl-AMP synthase, SUA5	Interproscan
IPR006070 all species →	Domain	Threonylcarbamoyl-AMP synthase-like domain	Interproscan
IPR017945 all species →	Homologous_superfamily	DHBP synthase RibB-like alpha/beta domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR17490 all species →	SUA5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000049 all species →	Molecular Function	tRNA binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006450 all species →	Biological Process	regulation of translational fidelity	Interproscan
GO:0016779 all species →	Molecular Function	nucleotidyltransferase activity	Interproscan
GO:0003725 all species →	Molecular Function	double-stranded RNA binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07566	tsaC, rimN, SUA5, YRDC; L-threonylcarbamoyladenylate synthase	EC:2.7.7.87	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.