Gene detail

Detailed information of XP_065057645.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_1682:6128847...6129392
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11938 all species →	DUF3456	TLR4 regulator and MIR-interacting MSAP	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021852 all species →	Domain	Domain of unknown function DUF3456	Interproscan
IPR042415 all species →	Family	Protein canopy homolog	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13341 all species →	MIR-INTERACTING SAPOSIN-LIKE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22936	CNPY1_2; protein canopy 1/2	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.