Detailed information of XP_065057764.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_1682:5858345...5867703
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02237
all species →		BPL_CBiotin protein ligase C terminal domainDomainInterproscan
PF03099
all species →		BPL_LplA_LipBBiotin/lipoate A/B protein ligase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003142
all species →		DomainBiotin protein ligase, C-terminalInterproscan
IPR045864
all species →		Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR004408
all species →		FamilyBiotin--acetyl-CoA-carboxylase ligaseInterproscan
IPR004143
all species →		DomainBiotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12835
all species →		BIOTIN PROTEIN LIGASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0036211
all species →		Biological Processprotein modification processInterproscan
GO:0004077
all species →		Molecular Functionbiotin--[biotin carboxyl-carrier protein] ligase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01942HLCS; biotin---protein ligaseEC:6.3.4.9
EC:6.3.4.10
EC:6.3.4.11
EC:6.3.4.15
Biotin metabolismko00780deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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