Gene detail

Detailed information of XP_065057915.1 in Rhopilema esculentum

Genomic Location: ScUbCFx_1682:7328864...7332997
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004199 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04908 all species →	SH3BGR	SH3-binding, glutamic acid-rich protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006993 all species →	Family	SH3-binding, glutamic acid-rich protein	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR051033 all species →	Family	SH3 domain-binding glutamic acid-rich protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12232 all species →	SH3 DOMAIN-BINDING GLUTAMIC ACID-RICH-LIKE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23740	SH3BGR; SH3 domain-binding glutamic acid-rich protein	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.