Genomic Location: ScUbCFx_1:656626...674911
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families
| CDS |
| LOC135686181 |
| Transcript |
| rna-XM_065202366.1 |
| Protein |
| XP_065058438.1 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | ULD|UBL|NEDD8 · all ubiquitin genes in this species |
| Ubiquitin family | E3|E3 activity RING|PHD · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02182 all species → | SAD_SRA | SAD/SRA domain | Domain | Interproscan |
| PF00628 all species → | PHD | PHD-finger | Domain | Interproscan |
| PF12148 all species → | TTD | Tandem tudor domain within UHRF1 | Domain | Interproscan |
| PF00240 all species → | ubiquitin | Ubiquitin family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019787 all species → | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR003105 all species → | Domain | SRA-YDG | Interproscan |
| IPR036987 all species → | Homologous_superfamily | SRA-YDG superfamily | Interproscan |
| IPR045134 all species → | Family | UHRF1/2-like | Interproscan |
| IPR001965 all species → | Domain | Zinc finger, PHD-type | Interproscan |
| IPR021991 all species → | Domain | UHRF1, tandem tudor domain | Interproscan |
| IPR015947 all species → | Homologous_superfamily | PUA-like superfamily | Interproscan |
| IPR019956 all species → | Domain | Ubiquitin domain | Interproscan |
| IPR000626 all species → | Domain | Ubiquitin-like domain | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR001841 all species → | Domain | Zinc finger, RING-type | Interproscan |
| IPR011011 all species → | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR029071 all species → | Homologous_superfamily | Ubiquitin-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14140 all species → | E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0010216 all species → | Biological Process | obsolete negative regulation of gene expression via chromosomal DNA cytosine methylation | Interproscan |
| GO:0016567 all species → | Biological Process | protein ubiquitination | Interproscan |
| GO:0061630 all species → | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
XP_065058438.1.
