Genomic Location: ScUbCFx_1:5537816...5562965
NR annotation: no NCBI-NR hit recorded
Species Rhopilema esculentum · all data for this species · gene families
| CDS |
| LOC135686263 |
| Transcript |
| rna-XM_065202463.1 |
| Protein |
| XP_065058535.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007807 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13866 all species → | zf-SAP30 | SAP30 zinc-finger | Domain | Interproscan |
| PF13867 all species → | SAP30_Sin3_bdg | Sin3 binding region of histone deacetylase complex subunit SAP30 | Family | Interproscan |
| PF05485 all species → | THAP | THAP domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR025717 all species → | Domain | Histone deacetylase complex subunit SAP30 zinc-finger | Interproscan |
| IPR038441 all species → | Homologous_superfamily | THAP-type zinc finger superfamily | Interproscan |
| IPR006612 all species → | Domain | THAP-type zinc finger | Interproscan |
| IPR025718 all species → | Domain | Histone deacetylase complex subunit SAP30, Sin3 binding domain | Interproscan |
| IPR024145 all species → | Family | Histone deacetylase complex subunit SAP30/SAP30-like | Interproscan |
| IPR038291 all species → | Homologous_superfamily | SAP30, C-terminal domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13286 all species → | SAP30 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0000118 all species → | Cellular Component | histone deacetylase complex | Interproscan |
| GO:0003712 all species → | Molecular Function | transcription coregulator activity | Interproscan |
| GO:0006355 all species → | Biological Process | regulation of DNA-templated transcription | Interproscan |
XP_065058535.1.
